RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 SREBF1P36956 1147 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 NOVP48745 357 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 UBAP2Q5T6F2 1119 aaKnown RBP16.03■□□□□ 0.16
TFE3-201ENST00000315869 SLFN11Q7Z7L1 901 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 RASGEF1CQ8N431 466 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 C1orf54Q8WWF1 131 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 LENG9Q96B70 501 aa16.03■□□□□ 0.16
TFE3-201ENST00000315869 PABPC3Q9H361 631 aaKnown RBP16.03■□□□□ 0.16
TFE3-201ENST00000315869 CNOT10Q9H9A5 744 aaKnown RBP16.03■□□□□ 0.16
TFE3-201ENST00000315869 TNS1Q9HBL0 1735 aaKnown RBP16.02■□□□□ 0.16
TFE3-201ENST00000315869 A0A0A6YYK5 440 aaPredicted RBP16.02■□□□□ 0.16
TFE3-201ENST00000315869 SLITRK3O94933 977 aa16.02■□□□□ 0.16
TFE3-201ENST00000315869 BYSLQ13895 437 aaKnown RBP16.02■□□□□ 0.16
TFE3-201ENST00000315869 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
TFE3-201ENST00000315869 GDAP1Q8TB36 358 aa16.02■□□□□ 0.16
TFE3-201ENST00000315869 TATDN2Q93075 761 aa16.02■□□□□ 0.16
TFE3-201ENST00000315869 RNF25Q96BH1 459 aaPredicted RBP16.02■□□□□ 0.16
TFE3-201ENST00000315869 ODF2LQ9ULJ1 636 aa16.02■□□□□ 0.16
TFE3-201ENST00000315869 CYP3A7-CYP3A51PA0A087WV96 503 aa16.02■□□□□ 0.15
TFE3-201ENST00000315869 DDX3YO15523 660 aaKnown RBP16.02■□□□□ 0.15
TFE3-201ENST00000315869 CYP3A7P24462 503 aa16.02■□□□□ 0.15
TFE3-201ENST00000315869 RPL21P46778 160 aaKnown RBP16.02■□□□□ 0.15
TFE3-201ENST00000315869 LONRF1Q17RB8 773 aa16.02■□□□□ 0.15
TFE3-201ENST00000315869 TMEM179Q6ZVK1 233 aa16.02■□□□□ 0.15
TFE3-201ENST00000315869 YTHDF3Q7Z739 585 aaKnown RBP16.02■□□□□ 0.15
TFE3-201ENST00000315869 ZKSCAN4Q969J2 545 aaPredicted RBP16.02■□□□□ 0.15
TFE3-201ENST00000315869 ZNF653Q96CK0 615 aa16.02■□□□□ 0.15
TFE3-201ENST00000315869 POP1Q99575 1024 aaKnown RBP16.02■□□□□ 0.15
TFE3-201ENST00000315869 INTUQ9ULD6 942 aa16.02■□□□□ 0.15
TFE3-201ENST00000315869 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.15
TFE3-201ENST00000315869 WNT10BO00744 389 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 TBX3O15119 743 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 HIP1RO75146 1068 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 BFSP1Q12934 665 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 FUKQ8N0W3 1084 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 CCDC63Q8NA47 563 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 SLC30A5Q8TAD4 765 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 HOMER2Q9NSB8 354 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 TCRBV7S2A1N4TA0A589 114 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 FOXO6A8MYZ6 492 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 CYP26A1O43174 497 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 KRT5P13647 590 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 GBP2P32456 591 aaPredicted RBP16.01■□□□□ 0.15
TFE3-201ENST00000315869 DPY19L2P1Q6NXN4 242 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 ZNF720Q7Z2F6 126 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 ATP8B4Q8TF62 1192 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 MRRFQ96E11 262 aaKnown RBP16.01■□□□□ 0.15
TFE3-201ENST00000315869 LXNQ9BS40 222 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 PRR12Q9ULL5 1215 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 CENPFP49454 3210 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 POLR2MP0CAP2 368 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 DLATP10515 647 aaKnown RBP16.01■□□□□ 0.15
TFE3-201ENST00000315869 DRD4P21917 467 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 ARHGEF19Q8IW93 802 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 THOC1Q96FV9 657 aaKnown RBP16.01■□□□□ 0.15
TFE3-201ENST00000315869 NACC1Q96RE7 527 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 FAM118BQ9BPY3 351 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 CXorf56Q9H5V9 222 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 NYAP2Q9P242 653 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 VAV3Q9UKW4 847 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 STK38LQ9Y2H1 464 aa16.01■□□□□ 0.15
TFE3-201ENST00000315869 GPC5P78333 572 aa16■□□□□ 0.15
TFE3-201ENST00000315869 PPP2R5EQ16537 467 aa16■□□□□ 0.15
TFE3-201ENST00000315869 Q4G0T1 1027 aa16■□□□□ 0.15
TFE3-201ENST00000315869 EPC2Q52LR7 807 aa16■□□□□ 0.15
TFE3-201ENST00000315869 SWT1Q5T5J6 900 aaKnown RBP16■□□□□ 0.15
TFE3-201ENST00000315869 DUPD1Q68J44 220 aa16■□□□□ 0.15
TFE3-201ENST00000315869 CCDC50Q8IVM0 306 aa16■□□□□ 0.15
TFE3-201ENST00000315869 RHOT2Q8IXI1 618 aa16■□□□□ 0.15
TFE3-201ENST00000315869 N4BP2L2Q92802 583 aaPredicted RBP16■□□□□ 0.15
TFE3-201ENST00000315869 SGSM3Q96HU1 749 aa16■□□□□ 0.15
TFE3-201ENST00000315869 CBWD1Q9BRT8 395 aa16■□□□□ 0.15
TFE3-201ENST00000315869 WDR18Q9BV38 432 aa16■□□□□ 0.15
TFE3-201ENST00000315869 OLFML3Q9NRN5 406 aa16■□□□□ 0.15
TFE3-201ENST00000315869 KIAA0391O15091 583 aaKnown RBP16■□□□□ 0.15
TFE3-201ENST00000315869 PPFIA2O75334 1257 aa16■□□□□ 0.15
TFE3-201ENST00000315869 SGPL1O95470 568 aa16■□□□□ 0.15
TFE3-201ENST00000315869 CALCAP01258 141 aa16■□□□□ 0.15
TFE3-201ENST00000315869 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
TFE3-201ENST00000315869 ARP10275 920 aa16■□□□□ 0.15
TFE3-201ENST00000315869 NPEPPSP55786 919 aa16■□□□□ 0.15
TFE3-201ENST00000315869 RASA3Q14644 834 aa16■□□□□ 0.15
TFE3-201ENST00000315869 TATDN1Q6P1N9 297 aa16■□□□□ 0.15
TFE3-201ENST00000315869 C6orf89Q6UWU4 347 aa16■□□□□ 0.15
TFE3-201ENST00000315869 ZC3H3Q8IXZ2 948 aaKnown RBP16■□□□□ 0.15
TFE3-201ENST00000315869 KIRREL3Q8IZU9 778 aa16■□□□□ 0.15
TFE3-201ENST00000315869 EIF1ADQ8N9N8 165 aaKnown RBP16■□□□□ 0.15
TFE3-201ENST00000315869 POLR3CQ9BUI4 534 aaPredicted RBP16■□□□□ 0.15
TFE3-201ENST00000315869 FAM129AQ9BZQ8 928 aa16■□□□□ 0.15
TFE3-201ENST00000315869 TPX2Q9ULW0 747 aaKnown RBP16■□□□□ 0.15
TFE3-201ENST00000315869 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
TFE3-201ENST00000315869 FAM187AA6NFU0 413 aa16■□□□□ 0.15
TFE3-201ENST00000315869 PHF2O75151 1096 aa16■□□□□ 0.15
TFE3-201ENST00000315869 PYGMP11217 842 aa16■□□□□ 0.15
TFE3-201ENST00000315869 C2CD6Q53TS8 623 aa16■□□□□ 0.15
TFE3-201ENST00000315869 C1orf186Q6ZWK4 172 aa16■□□□□ 0.15
TFE3-201ENST00000315869 PRELID2Q8N945 189 aa16■□□□□ 0.15
TFE3-201ENST00000315869 NSRP1Q9H0G5 558 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms