RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PPARGC1AQ9UBK2 798 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 FGFR4P22455 802 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 WDR75Q8IWA0 830 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 HSPBP1Q9NZL4 362 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 ANGPTL2Q9UKU9 493 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 SCP2P22307 547 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 TNFAIP2Q03169 654 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 MARCH10Q8NA82 808 aaPredicted RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 DAGLBQ8NCG7 672 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 TRIM51Q9BSJ1 452 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 SCOCQ9UIL1 159 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 G3BP2Q9UN86 482 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 TFR2Q9UP52 801 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 TTC4O95801 387 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 ERVK-24P63145 666 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 ST3GAL1Q11201 340 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 PDIA2Q13087 525 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 BYSLQ13895 437 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 NCAPHQ15003 741 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 CDC42EP5Q6NZY7 148 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 CYFIP1Q7L576 1253 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 SRLQ86TD4 932 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 ZBED8Q8IZ13 594 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 PPWD1Q96BP3 646 aaKnown RBP14.67□□□□□ -0.06
SPAST-201ENST00000315285 FGFR1OP2Q9NVK5 253 aa14.67□□□□□ -0.06
SPAST-201ENST00000315285 GYG2O15488 501 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 FDX1P10109 184 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 PHKA2P46019 1235 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 HNRNPLLQ8WVV9 542 aaKnown RBP14.66□□□□□ -0.06
SPAST-201ENST00000315285 LRRC37BQ96QE4 947 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 SLC9A2Q9UBY0 812 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 FIS1Q9Y3D6 152 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 COG7P83436 770 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 ARL13BQ3SXY8 428 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 NUDCD1Q96RS6 583 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 SH2D3AQ9BRG2 576 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 TRIM4Q9C037 500 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 NBPF3Q9H094 633 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 KLRC1P26715 233 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 MRPL4Q9BYD3 311 aaKnown RBP14.66□□□□□ -0.06
SPAST-201ENST00000315285 CYP26B1Q9NR63 512 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 PIM2Q9P1W9 311 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 ZFP69BQ9UJL9 534 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 AFF2P51816 1311 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 PITPNM2Q9BZ72 1349 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 GOLGA8CPA6NN73 597 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 EIF3HO15372 352 aaKnown RBP eCLIP14.66□□□□□ -0.06
SPAST-201ENST00000315285 SDC4P31431 198 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 PLCB4Q15147 1175 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 MUM1L1Q5H9M0 696 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 RPAINQ86UA6 219 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 C2orf40Q9H1Z8 148 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 PLAGL2Q9UPG8 496 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
SPAST-201ENST00000315285 GPR75-ASB3A0A0A6YYF3 556 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 H0Y3Z8 333 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 M0QYV0 167 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 RPA1P27694 616 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 HSP90AA5PQ58FG0 334 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 STRIP1Q5VSL9 837 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 LMBRD2Q68DH5 695 aaPredicted RBP14.65□□□□□ -0.06
SPAST-201ENST00000315285 MMGT1Q8N4V1 131 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 TIPINQ9BVW5 301 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 EPN3Q9H201 632 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 ACAD9Q9H845 621 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 PARVAQ9NVD7 372 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 DDX56Q9NY93 547 aaKnown RBP14.65□□□□□ -0.06
SPAST-201ENST00000315285 UVRAGQ9P2Y5 699 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 NTRK3Q16288 839 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 HHIPL2Q6UWX4 724 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 LRIG3Q6UXM1 1119 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 ATP11CQ8NB49 1132 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 SDCCAG3Q96C92 435 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 KCND2Q9NZV8 630 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 PRR12Q9ULL5 1215 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 RAD51CO43502 376 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 ZSCAN20P17040 1043 aaPredicted RBP14.65□□□□□ -0.06
SPAST-201ENST00000315285 SLC1A1P43005 524 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 RHPN2Q8IUC4 686 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 PPM1NQ8N819 430 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 ATL2Q8NHH9 583 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 ANKS1AQ92625 1134 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 SYN2Q92777 582 aaPredicted RBP14.65□□□□□ -0.06
SPAST-201ENST00000315285 SLIT1O75093 1534 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 PHF2O75151 1096 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 CARSP49589 748 aaKnown RBP14.65□□□□□ -0.06
SPAST-201ENST00000315285 TOPORSQ9NS56 1045 aaPredicted RBP14.65□□□□□ -0.06
SPAST-201ENST00000315285 DCTN4Q9UJW0 460 aa14.65□□□□□ -0.06
SPAST-201ENST00000315285 ADGRB2O60241 1585 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 MEFVO15553 781 aaPredicted RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 HSPA4LO95757 839 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 RFC1P35251 1148 aaPredicted RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 ZC2HC1CQ53FD0 456 aaPredicted RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 C4orf50Q6ZRC1 276 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 DNAJC7Q99615 494 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 TRAIPQ9BWF2 469 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 SLC12A6Q9UHW9 1150 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms