RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■■■ 62.8
KDM3A-201ENST00000312912 SGSM3Q96HU1 749 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 UPF3AQ9H1J1 476 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 ESYT2A0FGR8 921 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 TAF1BQ53T94 588 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 DHX38Q92620 1227 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 FAM213AQ9BRX8 229 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 TYW5A2RUC4 315 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 FOXP2O15409 715 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 PAX7P23759 505 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 CTCFP49711 727 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 HDLBPQ00341 1268 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 BYSLQ13895 437 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 EPHA7Q15375 998 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 STXBP2Q15833 593 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 GRAMD1BQ3KR37 738 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 KIAA2013Q8IYS2 634 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 HSPH1Q92598 858 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 APOBEC2Q9Y235 224 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 RSBN1LQ6PCB5 846 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 ELOA2Q8IYF1 753 aaPredicted RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 ABI1Q8IZP0 508 aa16.31■□□□□ 0.2
KDM3A-201ENST00000312912 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 PAPOLBQ9NRJ5 636 aaKnown RBP16.31■□□□□ 0.2
KDM3A-201ENST00000312912 ZBTB7AO95365 584 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 CDO1Q16878 200 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 KLC3Q6P597 504 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ZNF473Q8WTR7 871 aaKnown RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 NSUN4Q96CB9 384 aaKnown RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 IP6K2Q9UHH9 426 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 FDX1P10109 184 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 NUDCD3Q8IVD9 361 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 EIF2AK1Q9BQI3 630 aaKnown RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ECT2Q9H8V3 914 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 POLD4Q9HCU8 107 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 AMACRQ9UHK6 382 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 SUGT1Q9Y2Z0 365 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 CFLARO15519 480 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 KRT75O95678 551 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 HSPA4LO95757 839 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 GFAPP14136 432 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 PSMC5P62195 406 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ZNF699Q32M78 642 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 MYLK4Q86YV6 388 aaPredicted RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 OR6B3Q8NGW1 331 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 SKA2Q8WVK7 121 aaPredicted RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 TNFAIP2Q03169 654 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 OCA2Q04671 838 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 FSCBQ5H9T9 825 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ZNF746Q6NUN9 644 aaPredicted RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 CCNI2Q6ZMN8 369 aaPredicted RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ARHGAP22Q7Z5H3 698 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 PACS2Q86VP3 889 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 TTC39CQ8N584 583 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 FBXL13Q8NEE6 735 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 NRBF2Q96F24 287 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ABT1Q9ULW3 272 aaKnown RBP16.3■□□□□ 0.2
KDM3A-201ENST00000312912 ATP8B3O60423 1300 aa16.3■□□□□ 0.2
KDM3A-201ENST00000312912 HAUS5O94927 633 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
KDM3A-201ENST00000312912 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
KDM3A-201ENST00000312912 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
KDM3A-201ENST00000312912 CYTH2Q99418 400 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 SENP1Q9P0U3 644 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 UNC13BO14795 1591 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 GNGT2O14610 69 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 GRIN3BO60391 1043 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 CSF1RP07333 972 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 TRIM49P0CI25 452 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 TRIM49CP0CI26 452 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
KDM3A-201ENST00000312912 CCDC138Q96M89 665 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 UBE4BO95155 1302 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 FDPSP14324 419 aaKnown RBP16.29■□□□□ 0.2
KDM3A-201ENST00000312912 IRAK1P51617 712 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 NEK2P51955 445 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 ATP11CQ8NB49 1132 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 SNF8Q96H20 258 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 LXNQ9BS40 222 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 ZFP69BQ9UJL9 534 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 TTC7AQ9ULT0 858 aaPredicted RBP16.29■□□□□ 0.2
KDM3A-201ENST00000312912 ORC6Q9Y5N6 252 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 SLC26A4O43511 780 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 RAD9BQ6WBX8 426 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 CCT8L2Q96SF2 557 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 ETNK1Q9HBU6 452 aa16.29■□□□□ 0.2
KDM3A-201ENST00000312912 TOPORSQ9NS56 1045 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms