RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 PPP1R2P41236 205 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 EPHB4P54760 987 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 FPGSQ05932 587 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 NCBP1Q09161 790 aaKnown RBP13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 PPIGQ13427 754 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■□□ 17.4
CHMP2A-201ENST00000312547 DPCR1Q3MIW9 517 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 ZCWPW2Q504Y3 356 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 UBXN11Q5T124 520 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 EEF1DP3Q658K8 133 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 CNKSR3Q6P9H4 555 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 NELFCDQ8IXH7 590 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 MLKLQ8NB16 471 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 CPB2Q96IY4 423 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 TRAIPQ9BWF2 469 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 FTHL17Q9BXU8 183 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 PIN4Q9Y237 131 aaKnown RBP13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 SYCE3A1L190 88 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 TISP43B9A030 160 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 ANKRD63C9JTQ0 380 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 HNRNPDLO14979 420 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 N4BP3O15049 544 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 ADSSP30520 456 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 LIG4P49917 911 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 SNRPFP62306 86 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 MCL1Q07820 350 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 CENPPQ6IPU0 288 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 SASS6Q6UVJ0 657 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 RTN4RL1Q86UN2 441 aaPredicted RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 RPUSD2Q8IZ73 545 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 SYCP3Q8IZU3 236 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 TMEM174Q8WUU8 243 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 DHTKD1Q96HY7 919 aaPredicted RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 ZBTB45Q96K62 511 aaPredicted RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 HAPLN2Q9GZV7 340 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 SEMA6BQ9H3T3 888 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 AGPAT3Q9NRZ7 376 aa13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 TYW1Q9NV66 732 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 CGNQ9P2M7 1197 aaKnown RBP13.86□□□□□ -0.19
CHMP2A-201ENST00000312547 COL6A3P12111 3177 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 LTBP2Q14767 1821 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 A0A0B4J269 797 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 PDXKO00764 312 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 TYRO3Q06418 890 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 STIM1Q13586 685 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 STX1AQ16623 288 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 CT47A1Q5JQC4 288 aaPredicted RBP13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 FOXR2Q6PJQ5 311 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 MPZL3Q6UWV2 235 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 CDR2LQ86X02 465 aaPredicted RBP13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 C12orf56Q8IXR9 622 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 GOLGA5Q8TBA6 731 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 BICD1Q96G01 975 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 MED15Q96RN5 788 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 ADAM2Q99965 735 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 LBHD1Q9BQE6 289 aaPredicted RBP13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 CDT1Q9H211 546 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 RGS18Q9NS28 235 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 TRAF3IP3Q9Y228 551 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 MYH11P35749 1972 aa13.85□□□□□ -0.19
CHMP2A-201ENST00000312547 ABHD14A-ACY1A0A1B0GW23 586 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 C9IYK1 514 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 ENPP3O14638 875 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 PSMA7O14818 248 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 FAM189A1O60320 539 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 ZNF623O75123 536 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 ACRP10323 421 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 MCF2P10911 925 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 ZSCAN20P17040 1043 aaPredicted RBP13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 GARTP22102 1010 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 CCNE1P24864 410 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 MAGEA10P43363 369 aaPredicted RBP13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 PMS1P54277 932 aaKnown RBP13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 FAM189BP81408 668 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 NFIL3Q16649 462 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 DCAF4L1Q3SXM0 396 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 TMEM240Q5SV17 173 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 SLFN12LQ6IEE8 588 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 HS2ST1Q7LGA3 356 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 P2RX5Q93086 422 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 EIF2AQ9BY44 585 aaKnown RBP13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 C1orf112Q9NSG2 853 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 DMAC2Q9NW81 257 aa13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
CHMP2A-201ENST00000312547 A0A0U1RQF3 1178 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 H0YGN5 161 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 CLDN3O15551 220 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 EFCAB14O75071 495 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 BAIAP3O94812 1187 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 CCDC192P0DO97 292 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 ERCC5P28715 1186 aaPredicted RBP13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 LRRC63Q05C16 580 aa13.83□□□□□ -0.2
CHMP2A-201ENST00000312547 PAK1Q13153 545 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms