RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 GPC5P78333 572 aa27.32■■□□□ 1.96
HOXB3-201ENST00000311626 FAM102BQ5T8I3 360 aa27.32■■□□□ 1.96
HOXB3-201ENST00000311626 RSBN1LQ6PCB5 846 aaPredicted RBP27.32■■□□□ 1.96
HOXB3-201ENST00000311626 CYFIP2Q96F07 1278 aa27.32■■□□□ 1.96
HOXB3-201ENST00000311626 RAB17Q9H0T7 212 aa27.32■■□□□ 1.96
HOXB3-201ENST00000311626 PNMA2Q9UL42 364 aa27.32■■□□□ 1.96
HOXB3-201ENST00000311626 ATP9AO75110 1047 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 FAM107AO95990 144 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 PYGMP11217 842 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 PLS3P13797 630 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 RAPGEF5Q92565 580 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 DHX38Q92620 1227 aaKnown RBP27.31■■□□□ 1.96
HOXB3-201ENST00000311626 CNKSR1Q969H4 720 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 TAAR1Q96RJ0 339 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 MXI1P50539 228 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 ZDHHC24Q6UX98 284 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 CLEC4DQ8WXI8 215 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 AGO4Q9HCK5 861 aaKnown RBP27.31■■□□□ 1.96
HOXB3-201ENST00000311626 FEM1BQ9UK73 627 aa27.31■■□□□ 1.96
HOXB3-201ENST00000311626 UTRNP46939 3433 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 CCDC169A6NNP5 214 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 KIAA0391O15091 583 aaKnown RBP27.3■■□□□ 1.96
HOXB3-201ENST00000311626 PPFIA2O75334 1257 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 CPP00450 1065 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 YWHABP31946 246 aaKnown RBP27.3■■□□□ 1.96
HOXB3-201ENST00000311626 ARFGAP2Q8N6H7 521 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 RNF25Q96BH1 459 aaPredicted RBP27.3■■□□□ 1.96
HOXB3-201ENST00000311626 GMNCA6NCL1 334 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 PHF20L1A8MW92 1017 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 RPL21P46778 160 aaKnown RBP27.3■■□□□ 1.96
HOXB3-201ENST00000311626 CETN1Q12798 172 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 BIRC3Q13489 604 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 FAM160B2Q86V87 743 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 RHOT2Q8IXI1 618 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 EPS8L1Q8TE68 723 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 ZSWIM1Q9BR11 485 aa27.3■■□□□ 1.96
HOXB3-201ENST00000311626 SORBS3O60504 671 aa27.29■■□□□ 1.96
HOXB3-201ENST00000311626 PTGIRP43119 386 aa27.29■■□□□ 1.96
HOXB3-201ENST00000311626 QARSP47897 775 aaKnown RBP27.29■■□□□ 1.96
HOXB3-201ENST00000311626 HSD17B4P51659 736 aa27.29■■□□□ 1.96
HOXB3-201ENST00000311626 SF3B2Q13435 895 aaKnown RBP27.29■■□□□ 1.96
HOXB3-201ENST00000311626 TXLNGYQ9BZA5 131 aa27.29■■□□□ 1.96
HOXB3-201ENST00000311626 TMEM206Q9H813 350 aa27.29■■□□□ 1.96
HOXB3-201ENST00000311626 MUTP22033 750 aa27.29■■□□□ 1.96
HOXB3-201ENST00000311626 ADSSP30520 456 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 PTGER2P43116 358 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 PMS2P54278 862 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 MTMR1Q13613 665 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 OGFOD1Q8N543 542 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 SEMA4AQ9H3S1 761 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 NOCTQ9UK39 431 aaKnown RBP27.28■■□□□ 1.96
HOXB3-201ENST00000311626 TRPC6Q9Y210 931 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 ICAM1P05362 532 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 SLCO1A2P46721 670 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 XKR9Q5GH70 373 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 AGBL2Q5U5Z8 902 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 UBL4BQ8N7F7 174 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 NAP1L3Q99457 506 aaPredicted RBP27.28■■□□□ 1.96
HOXB3-201ENST00000311626 NUP85Q9BW27 656 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 DDX20Q9UHI6 824 aaKnown RBP27.28■■□□□ 1.96
HOXB3-201ENST00000311626 USP20Q9Y2K6 914 aa27.28■■□□□ 1.96
HOXB3-201ENST00000311626 RTN2O75298 545 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 FGFR4P22455 802 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 PSMD1Q99460 953 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 PI4K2AQ9BTU6 479 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 GRHL1Q9NZI5 618 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 DIS3Q9Y2L1 958 aaKnown RBP27.27■■□□□ 1.96
HOXB3-201ENST00000311626 TRAPPC3O43617 180 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 ATP2C2O75185 946 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 PEX5P50542 639 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 SLC29A2Q14542 456 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 SPRED3Q2MJR0 410 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 NBPF9Q3BBW0 867 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 SPDYE2Q495Y8 402 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 LARGE2Q8N3Y3 721 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 SYNPO2Q9UMS6 1093 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 TELO2Q9Y4R8 837 aa27.27■■□□□ 1.96
HOXB3-201ENST00000311626 ASTN2O75129 1339 aaPredicted RBP27.27■■□□□ 1.96
HOXB3-201ENST00000311626 SPOPO43791 374 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 PHF2O75151 1096 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 IFI35P80217 286 aaPredicted RBP27.26■■□□□ 1.95
HOXB3-201ENST00000311626 FMO1Q01740 532 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 RASA3Q14644 834 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 TNIP1Q15025 636 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 C2CD6Q53TS8 623 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 CCDC137Q6PK04 289 aaKnown RBP27.26■■□□□ 1.95
HOXB3-201ENST00000311626 H0YHG0 523 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 ZNF653Q96CK0 615 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 AZI2Q9H6S1 392 aa27.26■■□□□ 1.95
HOXB3-201ENST00000311626 SNRNP35Q16560 246 aaKnown RBP27.25■■□□□ 1.95
HOXB3-201ENST00000311626 ZNF564Q8TBZ8 553 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-201ENST00000311626 SYTL5Q8TDW5 730 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-201ENST00000311626 TATDN2Q93075 761 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 SELENOSQ9BQE4 189 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 CCNE2O96020 404 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 C11orf63Q6NUN7 778 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 LLGL2Q6P1M3 1020 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 CCDC25Q86WR0 208 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 FAM71AQ8IYT1 594 aa27.25■■□□□ 1.95
HOXB3-201ENST00000311626 RPTORQ8N122 1335 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms