RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CCDC138Q96M89 665 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TEKT2Q9UIF3 430 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PRRG1O14668 218 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 AXLP30530 894 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TBC1D10BQ4KMP7 808 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 LRRC24Q50LG9 513 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 E4F1Q66K89 784 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 LMBRD2Q68DH5 695 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SESTD1Q86VW0 696 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 U2AF1L4Q8WU68 220 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 GPRASP2Q96D09 838 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC126Q96EE4 140 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 UIMC1Q96RL1 719 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MKNK1Q9BUB5 465 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 WNT8AQ9H1J5 351 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RPAP3Q9H6T3 665 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 BFARQ9NZS9 450 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RCOR1Q9UKL0 485 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MAPK8IP1Q9UQF2 711 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ICE1Q9Y2F5 2266 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CFAP69A5D8W1 941 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PHF20L1A8MW92 1017 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 H3BRJ5 948 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SLC9A3R1O14745 358 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 HIP1RO75146 1068 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RPS6KA5O75582 802 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 EIF2AK2P19525 551 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MAP4P27816 1152 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 SOX5P35711 763 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 NKX1-1Q15270 411 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 KLHL38Q2WGJ6 581 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 RHPN2Q8IUC4 686 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 FBXL13Q8NEE6 735 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 TDRD7Q8NHU6 1098 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 GDAP1Q8TB36 358 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ZDHHC15Q96MV8 337 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PANX2Q96RD6 677 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PLIN2Q99541 437 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 BPIFA3Q9BQP9 254 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 DCP1AQ9NPI6 582 aaPredicted RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 KCNJ14Q9UNX9 436 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ZC3H4Q9UPT8 1303 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 DCTN3O75935 186 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 LRG1P02750 347 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CYP21A2P08686 494 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 DNAJB2P25686 324 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 FNTAP49354 379 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 EPHB4P54760 987 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 HNRNPH2P55795 449 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 POLR2LP62875 67 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 GPC5P78333 572 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PRAMEP78395 509 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PPP2R5CQ13362 524 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MAPRE2Q15555 327 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF484Q5JVG2 852 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 EMBQ6PCB8 327 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MTHFD1LQ6UB35 978 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 LINC00523Q86TU6 105 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 MFN1Q8IWA4 741 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 NELFCDQ8IXH7 590 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 GPC2Q8N158 579 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 ACRBPQ8NEB7 543 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 CNPY3Q9BT09 278 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 BHMT2Q9H2M3 363 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 NDST4Q9H3R1 872 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 VCPKMTQ9H867 229 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 HDAC6Q9UBN7 1215 aa3.39□□□□□ -1.87
CLOCK-201ENST00000309964 NXF1Q9UBU9 619 aaKnown RBP3.39□□□□□ -1.87
CLOCK-201ENST00000309964 PIK3R2O00459 728 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 HIST1H2AGP0C0S8 130 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 HIST1H2ADP20671 130 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SLC8A1P32418 973 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 HDAC4P56524 1084 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ETF1P62495 437 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RAD51AP2Q09MP3 1159 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CAPRIN1Q14444 709 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CCNG2Q16589 344 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 Q3C1V9 767 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EFHC1Q5JVL4 640 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 IRAK1BP1Q5VVH5 260 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 KAZNQ674X7 775 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 LRRC8BQ6P9F7 803 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 DARS2Q6PI48 645 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 GPD1LQ8N335 351 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TNIP2Q8NFZ5 429 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGEF26Q96DR7 871 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SCYL1Q96KG9 808 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 HIST1H2AHQ96KK5 128 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 HIST1H2AJQ99878 128 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 H2AFJQ9BTM1 129 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CCSER1Q9C0I3 900 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EHD4Q9H223 541 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 FBXO44Q9H4M3 255 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 NCOA5Q9HCD5 579 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 OGFRQ9NZT2 677 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ADAM22Q9P0K1 906 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CEP72Q9P209 647 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SH3BP1Q9Y3L3 701 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 A0A0D9SFI3 127 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 A0A1W2PQC6 194 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms