RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 SMAPO00193 183 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 CLPTM1O96005 669 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 CHRNA3P32297 505 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 ITGA8P53708 1063 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 BASP1P80723 227 aaKnown RBP11.55□□□□□ -0.56
GGA2-201ENST00000309859 BFSP1Q12934 665 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 UBE3CQ15386 1083 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 PDXDC2PQ6P474 469 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 USP6NLQ92738 828 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
GGA2-201ENST00000309859 IWS1Q96ST2 819 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 TSSK1BQ9BXA7 367 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 ANKFY1Q9P2R3 1169 aa11.55□□□□□ -0.56
GGA2-201ENST00000309859 E2F8A0AVK6 867 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 FAM187AA6NFU0 413 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 CYP2D6P10635 497 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 RPL21P46778 160 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 MYL7Q01449 175 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 LRRC63Q05C16 580 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 HIC1Q14526 733 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 STXBP4Q6ZWJ1 553 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 SRBD1Q8N5C6 995 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 CATSPER2Q96P56 530 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 MRPL1Q9BYD6 325 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 CAAP1Q9H8G2 361 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 C2orf71A6NGG8 1288 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 ZWINTO95229 277 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 ADCY7P51828 1080 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 COASYQ13057 564 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 C6orf89Q6UWU4 347 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 RBM44Q6ZP01 1051 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PRPF39Q86UA1 669 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 CCT7Q99832 543 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 MTFR1LQ9H019 292 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 SUCLA2Q9P2R7 463 aaPredicted RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 PACSIN3Q9UKS6 424 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 R3HDM2Q9Y2K5 976 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 NDC80O14777 642 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 LPXNO60711 386 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 SOX11P35716 441 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 RPS6P62753 249 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 PPIDQ08752 370 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 USH1GQ495M9 461 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PYROXD1Q8WU10 500 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 DYNLL2Q96FJ2 89 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 GCNAQ96QF7 691 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 BHMT2Q9H2M3 363 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 F5H423 210 aaPredicted RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 MCF2P10911 925 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 NELFEP18615 380 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 TRAPPC10P48553 1259 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PDIA2Q13087 525 aaKnown RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 DRAP1Q14919 205 aaPredicted RBP11.54□□□□□ -0.56
GGA2-201ENST00000309859 CNPY1Q3B7I2 92 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 TLDC1Q6P9B6 456 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 MTHFD1LQ6UB35 978 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PCMTD2Q9NV79 361 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 SYNGAP1Q96PV0 1343 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 SSU72P8A0A1W2PR75 194 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 RIPK2O43353 540 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PHF2O75151 1096 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 TRIM49P0CI25 452 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 TRIM49CP0CI26 452 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PTPN4P29074 926 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 MAPKAPK5Q8IW41 473 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PHF20Q9BVI0 1012 aa11.54□□□□□ -0.56
GGA2-201ENST00000309859 PSMG1O95456 288 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 ABL2P42684 1182 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 RASA3Q14644 834 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 PRR16Q569H4 304 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 CDCA2Q69YH5 1023 aaPredicted RBP11.53□□□□□ -0.56
GGA2-201ENST00000309859 HEATR4Q86WZ0 1026 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 FAM186BQ8IYM0 893 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 PPP4R1Q8TF05 950 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 TRAPPC9Q96Q05 1148 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 ERGIC2Q96RQ1 377 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 TRPV6Q9H1D0 765 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 TRIM43BA6NCK2 446 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 MYMKA6NI61 221 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 CIITAP33076 1130 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 KHDC1Q4VXA5 237 aaKnown RBP11.53□□□□□ -0.56
GGA2-201ENST00000309859 DCUN1D2Q6PH85 259 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 USP17L2Q6R6M4 530 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 UNC13DQ70J99 1090 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 MAGEB18Q96M61 343 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 TUBB6Q9BUF5 446 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 MAPK7Q13164 816 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 DHX34Q14147 1143 aaKnown RBP11.53□□□□□ -0.56
GGA2-201ENST00000309859 MEA1Q16626 185 aa11.53□□□□□ -0.56
GGA2-201ENST00000309859 PRUNE1Q86TP1 453 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms