RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 TIPINQ9BVW5 301 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 TBC1D22BQ9NU19 505 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 ZDHHC18Q9NUE0 388 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 WNT10BO00744 389 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 PPFIA2O75334 1257 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 SNRPFP62306 86 aaKnown RBP16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 RPS6P62753 249 aaKnown RBP16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 MAP2K1Q02750 393 aaPredicted RBP16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 FAM102BQ5T8I3 360 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 AGBL2Q5U5Z8 902 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 CPNE8Q86YQ8 564 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 RAB17Q9H0T7 212 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 CENPHQ9H3R5 247 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 ACP6Q9NPH0 428 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
SPIRE1-201ENST00000309836 GOLGA6L10A0A0M3HER8 536 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 ATMINO43313 823 aaPredicted RBP16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 MTA2O94776 668 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 MYCLP12524 364 aaPredicted RBP16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 KCNA3P22001 575 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 HPDP32754 393 aaPredicted RBP16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 PTGIRP43119 386 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 PSMC5P62195 406 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 BIRC3Q13489 604 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 PPP2R5EQ16537 467 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 XKR9Q5GH70 373 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 EFCAB13Q8IY85 973 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 TMEM161BQ8NDZ6 487 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 SHC3Q92529 594 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 LPAR1Q92633 364 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 GLG1Q92896 1179 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 SAAL1Q96ER3 474 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 ERP44Q9BS26 406 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 KIFC3Q9BVG8 833 aa16.4■□□□□ 0.22
SPIRE1-201ENST00000309836 CYP26A1O43174 497 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 COMTP21964 271 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 PEX5P50542 639 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 JAK3P52333 1124 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 FMO1Q01740 532 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 RASA3Q14644 834 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 SLC47A2Q86VL8 602 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 JAMLQ86YT9 394 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 NIM1KQ8IY84 436 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 ZDHHC14Q8IZN3 488 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 PRELID2Q8N945 189 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 BSNDQ8WZ55 320 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 CD101Q93033 1021 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 TEPSINQ96N21 525 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 RPS6KC1Q96S38 1066 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 PDCD2LQ9BRP1 358 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 PDGFDQ9GZP0 370 aaPredicted RBP16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 FAM107BQ9H098 131 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 TOPORSQ9NS56 1045 aaPredicted RBP16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 ANKEF1Q9NU02 776 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 SLC12A6Q9UHW9 1150 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 TBX20Q9UMR3 447 aa16.39■□□□□ 0.22
SPIRE1-201ENST00000309836 PHF2O75151 1096 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 MMEP08473 750 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 DPEP1P16444 411 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 NPTX2P47972 431 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 SEC24CP53992 1094 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 CXCL9Q07325 125 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 DHX34Q14147 1143 aaKnown RBP16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 MESDQ14696 234 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 SNRNP35Q16560 246 aaKnown RBP16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 SLC39A4Q6P5W5 647 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 ZDHHC24Q6UX98 284 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 RUFY4Q6ZNE9 571 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 MAP4K3Q8IVH8 894 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 UBL4BQ8N7F7 174 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 HELQQ8TDG4 1101 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 ZNF473Q8WTR7 871 aaKnown RBP16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 C18orf8Q96DM3 657 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 IWS1Q96ST2 819 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 FMO2Q99518 471 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 EPB41L4BQ9H329 900 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 PXMP2Q9NR77 195 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 STK32BQ9NY57 414 aa16.39■□□□□ 0.21
SPIRE1-201ENST00000309836 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 SRRM3A6NNA2 597 aaPredicted RBP16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 WDR64B1ANS9 1081 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 KIAA0391O15091 583 aaKnown RBP16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 CYP1A2P05177 515 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 GZMAP12544 262 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 CTNNA2P26232 953 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 CLUL1Q15846 466 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 TTC27Q6P3X3 843 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 NLRP14Q86W24 1093 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 PPM1KQ8N3J5 372 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 PPM1EQ8WY54 764 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 RMDN3Q96TC7 470 aa16.38■□□□□ 0.21
SPIRE1-201ENST00000309836 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms