RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 EXOC7Q9UPT5 735 aa12.46□□□□□ -0.41
PTPN2-201ENST00000309660 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.41
PTPN2-201ENST00000309660 NFKBIEO00221 500 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF862O60290 1169 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 ANXA13P27216 316 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 GTF2BQ00403 316 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 ODF2Q5BJF6 829 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 C1orf220Q5T0J3 134 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 RUBCNQ92622 972 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 HES6Q96HZ4 224 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 MOV10L1Q9BXT6 1211 aaKnown RBP12.46□□□□□ -0.42
PTPN2-201ENST00000309660 INTUQ9ULD6 942 aa12.46□□□□□ -0.42
PTPN2-201ENST00000309660 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
PTPN2-201ENST00000309660 GOLGA6L10A0A0M3HER8 536 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 TRIM66O15016 1216 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 CCT5P48643 541 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 ALCAMQ13740 583 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 DCAF12L1Q5VU92 463 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 OTUD6AQ7L8S5 288 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 TMEM161BQ8NDZ6 487 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 ZBED3Q96IU2 234 aaPredicted RBP12.45□□□□□ -0.42
PTPN2-201ENST00000309660 IWS1Q96ST2 819 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 SFNP31947 248 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 IRAK1P51617 712 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 KRT39Q6A163 491 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 NIPA1Q7RTP0 329 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 SLFN11Q7Z7L1 901 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF653Q96CK0 615 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 KREMEN1Q96MU8 473 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 PCDHB18PQ96TA0 734 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 ISCUQ9H1K1 167 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 TMEM59LQ9UK28 342 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 NENFQ9UMX5 172 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 SMIM23A6NLE4 172 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 CCDC188H7C350 402 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 BIRC3Q13489 604 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 KIF22Q14807 665 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 SEPT14Q6ZU15 432 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 OLIG1Q8TAK6 271 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 ATP6V0A1Q93050 837 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 TATDN2Q93075 761 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 TMEM143Q96AN5 459 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 ERVK-5Q9HDB9 667 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 ATP8A1Q9Y2Q0 1164 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
PTPN2-201ENST00000309660 TNNI1P19237 187 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 HSD17B3P37058 310 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 MFAP3P55082 362 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 GPC5P78333 572 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 GUCY1A3Q02108 690 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 PRKCEQ02156 737 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 VSIG10LQ86VR7 867 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 CCDC60Q8IWA6 550 aaPredicted RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 IQCKQ8N0W5 287 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 UHMK1Q8TAS1 419 aaKnown RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 EPS8L1Q8TE68 723 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 NT5C1BQ96P26 610 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 ANKFY1Q9P2R3 1169 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 RRP15Q9Y3B9 282 aaKnown RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 ADGRA3Q8IWK6 1321 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 COMTP21964 271 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 ACOT2P49753 483 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 PDE6CP51160 858 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 FMNL3Q8IVF7 1028 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 SCYL3Q8IZE3 742 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 PARD3BQ8TEW8 1205 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 CALR3Q96L12 384 aaKnown RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 RGS17Q9UGC6 210 aaPredicted RBP12.44□□□□□ -0.42
PTPN2-201ENST00000309660 SNX24Q9Y343 169 aa12.44□□□□□ -0.42
PTPN2-201ENST00000309660 PTPRAP18433 802 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 LIG4P49917 911 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 POLGP54098 1239 aaPredicted RBP12.43□□□□□ -0.42
PTPN2-201ENST00000309660 PLTPP55058 493 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 DR1Q01658 176 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 PPATQ06203 517 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 IFFO1Q0D2I5 559 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 TMEM132BQ14DG7 1078 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 SEZ6Q53EL9 994 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 RHOT2Q8IXI1 618 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 NUP85Q9BW27 656 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 DDX3YO15523 660 aaKnown RBP12.43□□□□□ -0.42
PTPN2-201ENST00000309660 CUL1Q13616 776 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 SV2AQ7L0J3 742 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 UBL4BQ8N7F7 174 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 FBXL13Q8NEE6 735 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms