RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 USP37Q86T82 979 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 VPS36Q86VN1 386 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 RNF10Q8N5U6 811 aaKnown RBP23.07■■□□□ 1.28
ATG4D-201ENST00000309469 PRPF31Q8WWY3 499 aaKnown RBP23.07■■□□□ 1.28
ATG4D-201ENST00000309469 FAM213AQ9BRX8 229 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 KIAA1586Q9HCI6 787 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 SALL4Q9UJQ4 1053 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 CAPN6Q9Y6Q1 641 aa23.07■■□□□ 1.28
ATG4D-201ENST00000309469 ZBTB42B2RXF5 422 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 EXTL3O43909 919 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 ADCY3O60266 1144 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 KRT39Q6A163 491 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 GPR142Q7Z601 462 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 VTI1AQ96AJ9 217 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 POP1Q99575 1024 aaKnown RBP23.06■■□□□ 1.28
ATG4D-201ENST00000309469 TMEM8AQ9HCN3 771 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 UBE2TQ9NPD8 197 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-201ENST00000309469 HDAC6Q9UBN7 1215 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 ZNFX1Q9P2E3 1918 aaKnown RBP23.06■■□□□ 1.28
ATG4D-201ENST00000309469 ZNF233A6NK53 670 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 TULP1O00294 542 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-201ENST00000309469 KIAA0391O15091 583 aaKnown RBP23.06■■□□□ 1.28
ATG4D-201ENST00000309469 GAS2O43903 313 aaKnown RBP23.06■■□□□ 1.28
ATG4D-201ENST00000309469 LRRN2O75325 713 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 CCDC172P0C7W6 258 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 GTF2H1P32780 548 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-201ENST00000309469 ARHGAP1Q07960 439 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 LAMC2Q13753 1193 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 NAB2Q15742 525 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 ARHGAP44Q17R89 818 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 TCP11Q8WWU5 503 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 NAGPAQ9UK23 515 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 SAR1BQ9Y6B6 198 aa23.06■■□□□ 1.28
ATG4D-201ENST00000309469 IGKV6-21A0A0C4DH24 114 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 RBM47A0AV96 593 aaKnown RBP23.05■■□□□ 1.28
ATG4D-201ENST00000309469 KIAA0753Q2KHM9 967 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 SLFN12LQ6IEE8 588 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 RSRC2Q7L4I2 434 aaKnown RBP23.05■■□□□ 1.28
ATG4D-201ENST00000309469 ARHGEF19Q8IW93 802 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 NOX5Q96PH1 765 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 ALS2CR12Q96Q35 445 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 SUGCTQ9HAC7 445 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.05■■□□□ 1.28
ATG4D-201ENST00000309469 COQ4Q9Y3A0 265 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 JRKLQ9Y4A0 524 aa23.05■■□□□ 1.28
ATG4D-201ENST00000309469 MKRN4PQ13434 485 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 GRB14Q14449 540 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 BMS1Q14692 1282 aaKnown RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 FAM110CQ1W6H9 321 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 MAMDC4Q6UXC1 1216 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 DPP9Q86TI2 863 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 PSPC1Q8WXF1 523 aaKnown RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 TARS2Q9BW92 718 aaKnown RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 PACSIN1Q9BY11 444 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 PUF60Q9UHX1 559 aaKnown RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 AGO2Q9UKV8 859 aaKnown RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 NENFQ9UMX5 172 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 TRPC6Q9Y210 931 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 FOXN3O00409 490 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 HBP1O60381 514 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 GH1P01241 217 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 ALKBH5Q6P6C2 394 aaKnown RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 JPH2Q9BR39 696 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 KATNBL1Q9H079 304 aa23.04■■□□□ 1.28
ATG4D-201ENST00000309469 TOPORSQ9NS56 1045 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-201ENST00000309469 DDX3XO00571 662 aaKnown RBP eCLIP23.03■■□□□ 1.283e-7■■■■□ 19.9
ATG4D-201ENST00000309469 SNAI1O95863 264 aaPredicted RBP23.03■■□□□ 1.28
ATG4D-201ENST00000309469 TFRCP02786 760 aaKnown RBP23.03■■□□□ 1.28
ATG4D-201ENST00000309469 EFNA5P52803 228 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 CHMP4BP1P59074 171 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 MXD4Q14582 209 aaPredicted RBP23.03■■□□□ 1.28
ATG4D-201ENST00000309469 GJC2Q5T442 439 aaPredicted RBP23.03■■□□□ 1.28
ATG4D-201ENST00000309469 PLEKHH3Q7Z736 793 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 GOLGA1Q92805 767 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 SEMA4DQ92854 862 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 ZBTB45Q96K62 511 aaPredicted RBP23.03■■□□□ 1.28
ATG4D-201ENST00000309469 HAPLN2Q9GZV7 340 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 NMRK2Q9NPI5 230 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 ERAP1Q9NZ08 941 aa23.03■■□□□ 1.28
ATG4D-201ENST00000309469 BUB1O43683 1085 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 ITGBL1O95965 494 aaPredicted RBP23.02■■□□□ 1.28
ATG4D-201ENST00000309469 DLATP10515 647 aaKnown RBP23.02■■□□□ 1.28
ATG4D-201ENST00000309469 KLRC1P26715 233 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 MAPK4P31152 587 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 HUNKP57058 714 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 LAMTOR4Q0VGL1 99 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 LRRC71Q8N4P6 559 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 SLC30A5Q8TAD4 765 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 UBE2Q2Q8WVN8 375 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 PLXNB2O15031 1838 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 BTNL10A8MVZ5 291 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 EDN1P05305 212 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 GPC3P51654 580 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 NAP1L1P55209 391 aaKnown RBP23.02■■□□□ 1.28
ATG4D-201ENST00000309469 KIF22Q14807 665 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 PSMD6Q15008 389 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 TEX35Q5T0J7 233 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 SV2AQ7L0J3 742 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 FBXL13Q8NEE6 735 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms