RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TEX2Q8IWB9 1127 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 NUDT12Q9BQG2 462 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 WNT8AQ9H1J5 351 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 PLAAQ9Y263 795 aa12.22□□□□□ -0.45
PCDHGC3-201ENST00000308177 VCAM1P19320 739 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 FUT2Q10981 343 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 ANKRD20A3Q5VUR7 823 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 ARMCX2Q7L311 632 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 MTFR1LQ9H019 292 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 SUCLA2Q9P2R7 463 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 HMGB1P1B2RPK0 211 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 WNT10BO00744 389 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 ABL1P00519 1130 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 MYL3P08590 195 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 TROVE2P10155 538 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 MYBL1P10243 752 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 KLRC1P26715 233 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 MXD4Q14582 209 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 CDO1Q16878 200 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 METTL23Q86XA0 190 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 SLC35G2Q8TBE7 412 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 ANKRD7Q92527 254 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 BEGAINQ9BUH8 593 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 SLITRK6Q9H5Y7 841 aa12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 MORC2Q9Y6X9 1032 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 FAM208AQ9UK61 1670 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-201ENST00000308177 INHBAP08476 426 aa12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 GGCXP38435 758 aa12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 ZNF131P52739 623 aa12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 PSMC6P62333 389 aa12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 MKL1Q969V6 931 aa12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 ZCCHC17Q9NP64 241 aaKnown RBP12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.46
PCDHGC3-201ENST00000308177 P4HA2O15460 535 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLC25A27O95847 323 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 CHRNA3P32297 505 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 DMTNQ08495 405 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SIX6OS1Q8N1H7 587 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 COG1Q8WTW3 980 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 MS4A14Q96JA4 679 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 CFAP57Q96MR6 1250 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SMARCAD1Q9H4L7 1026 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 BLOC1S4Q9NUP1 217 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 ABCC6O95255 1503 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 FAM86B1E9PN63 330 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 FAM86B2P0C5J1 330 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SCP2P22307 547 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 CASP4P49662 377 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 ACTR2P61160 394 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SPOUT1Q5T280 376 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 ANKRD13AQ8IZ07 590 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SAMD3Q8N6K7 520 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 HVCN1Q96D96 273 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 C17orf75Q9HAS0 396 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SART1O43290 800 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 ACSL3O95573 720 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 GNAT1P11488 350 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 RFC5P40937 340 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 RSRC2Q7L4I2 434 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 ABI1Q8IZP0 508 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 CCNYQ8ND76 341 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 AMACRQ9UHK6 382 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 FKBP1CQ5VVH2 108 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 GJB7Q6PEY0 223 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 KIFC3Q9BVG8 833 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 GPRC5CQ9NQ84 441 aa12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
PCDHGC3-201ENST00000308177 BMP6P22004 513 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 ADCY1Q08828 1119 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 TMEM119Q4V9L6 283 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 TWF2Q6IBS0 349 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 RHOT1Q8IXI2 618 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 HSPH1Q92598 858 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 TBC1D31Q96DN5 1066 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 CNOT10Q9H9A5 744 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 TBK1Q9UHD2 729 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 LCMT1Q9UIC8 334 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 TBX20Q9UMR3 447 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 A0A087X0T9 212 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 FAM228BP0C875 321 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLC12A2P55011 1212 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 C6orf118Q5T5N4 469 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 TRIM65Q6PJ69 517 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLC30A10Q6XR72 485 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 PDIK1LQ8N165 341 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 PDCD2LQ9BRP1 358 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 KIAA1683Q9H0B3 1180 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 DISP2A7MBM2 1401 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms