RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 COX16Q9P0S2 106 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 FER1L4A9Z1Z3 1794 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 ATRNO75882 1429 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 ESYT2A0FGR8 921 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 PODXLO00592 558 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 MTMR1Q13613 665 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 C6orf163Q5TEZ5 329 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 HGSNATQ68CP4 663 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 LDHDQ86WU2 507 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 NCAPGQ9BPX3 1015 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 GINM1Q9NU53 330 aa12.14□□□□□ -0.47
PHTF2-203ENST00000307305 ECE2O60344 883 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 BYSLQ13895 437 aaKnown RBP12.13□□□□□ -0.47
PHTF2-203ENST00000307305 QPCTQ16769 361 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 CDO1Q16878 200 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 PRUNE1Q86TP1 453 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 CBWD2Q8IUF1 395 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 JDP2Q8WYK2 163 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 KAT2BQ92831 832 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 CAVIN3Q969G5 261 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 HSPBP1Q9NZL4 362 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 PPP1R11O60927 126 aaPredicted RBP12.13□□□□□ -0.47
PHTF2-203ENST00000307305 ZBED4O75132 1171 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 CHRNA3P32297 505 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 RASA3Q14644 834 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 HIPK4Q8NE63 616 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 PAGR1Q9BTK6 254 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 TMEM206Q9H813 350 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 NOL4O94818 638 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 SHMT1P34896 483 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 APBB1IPQ7Z5R6 666 aaPredicted RBP12.13□□□□□ -0.47
PHTF2-203ENST00000307305 CROCCP2Q86T23 111 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 TTC17Q96AE7 1141 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 GBP1P32455 592 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 GPS1Q13098 491 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 EPM2AIP1Q7L775 607 aaPredicted RBP12.13□□□□□ -0.47
PHTF2-203ENST00000307305 SLC47A2Q86VL8 602 aa12.13□□□□□ -0.47
PHTF2-203ENST00000307305 MIF4GDA9UHW6 222 aaKnown RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 F8VZ95 297 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 ATP2A2P16615 1042 aaKnown RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 SCTRP47872 440 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 RHBDL3P58872 404 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 DLG4P78352 724 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 IZUMO3Q5VZ72 239 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 SLC17A8Q8NDX2 589 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 GRK7Q8WTQ7 553 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 INPP4AQ96PE3 977 aaPredicted RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 CYTH2Q99418 400 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 YIPF3Q9GZM5 350 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 SUCLA2Q9P2R7 463 aaPredicted RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 CTNNAL1Q9UBT7 734 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 G3BP2Q9UN86 482 aaKnown RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 RGPD5Q99666 1765 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 H7C0C1 242 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 GJB6O95452 261 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 MYH6P13533 1939 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 MSH2P43246 934 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 ATP5OP48047 213 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 DNAJC3Q13217 504 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 PALB2Q86YC2 1186 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 ZBED8Q8IZ13 594 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 TTLL3Q9Y4R7 772 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 ARHGAP42A6NI28 874 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 MAP3K6O95382 1288 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 KITP10721 976 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
PHTF2-203ENST00000307305 FAM182AQ5T1J6 154 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 SWSAP1Q6NVH7 229 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 CCDC62Q6P9F0 684 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 IQCKQ8N0W5 287 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 ANKRD35Q8N283 1001 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 PPFIBP2Q8ND30 876 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 IWS1Q96ST2 819 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 GDF3Q9NR23 364 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 AIPL1Q9NZN9 384 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 GABBR1Q9UBS5 961 aa12.12□□□□□ -0.47
PHTF2-203ENST00000307305 CCT8L1PA6NM43 557 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 DESP17661 470 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 MAPK7Q13164 816 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TMC3Q7Z5M5 1100 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 CFAP61Q8NHU2 1237 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TROVE2P10155 538 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHTF2-203ENST00000307305 KRT10P13645 584 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 SAT1P21673 171 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 ARSHQ5FYA8 562 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 MDH1BQ5I0G3 518 aa12.11□□□□□ -0.47
PHTF2-203ENST00000307305 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms