RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 NR1I2O75469 434 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 ZNF174Q15697 407 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 SLC27A1Q6PCB7 646 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 TMEM173Q86WV6 379 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 ZNF280BQ86YH2 543 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 SMG8Q8ND04 991 aaKnown RBP18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 KIF2CQ99661 725 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 RAB34Q9BZG1 259 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 C2orf40Q9H1Z8 148 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 PRMT7Q9NVM4 692 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 SSX2IPQ9Y2D8 614 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 GIT1Q9Y2X7 761 aa18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 TDRD15B5MCY1 1934 aaKnown RBP18.48■□□□□ 0.55
TRAPPC1-201ENST00000303731 ST18O60284 1047 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 MED24O75448 989 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 ARF4P18085 180 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 RABEP1Q15276 862 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 AMHR2Q16671 573 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 ZBTB8OSQ8IWT0 167 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 EDAQ92838 391 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 RPGRIP1Q96KN7 1286 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 RIPOR3Q96MK2 946 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 EMILIN2Q9BXX0 1053 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 EIF2AQ9BY44 585 aaKnown RBP18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 KCNH6Q9H252 994 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 ADAM7Q9H2U9 754 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 NR2E1Q9Y466 385 aa18.47■□□□□ 0.55
TRAPPC1-201ENST00000303731 TRIOO75962 3097 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 A0A1B0GUA9 196 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 ARL5CA6NH57 179 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 LRRIQ4A6NIV6 560 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 LAD1O00515 517 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 DDHD2O94830 711 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 POMCP01189 267 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 U2AF2P26368 475 aaKnown RBP eCLIP18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 MTHFRP42898 656 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 PTPN14Q15678 1187 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 FAM187BQ17R55 369 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 CDCA2Q69YH5 1023 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 CPB2Q96IY4 423 aa18.46■□□□□ 0.55
TRAPPC1-201ENST00000303731 ARHGEF35A5YM69 484 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 NRP1O14786 923 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 SOD2P04179 222 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 MLH1P40692 756 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 DSC1Q08554 894 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 PDIA5Q14554 519 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 PPP2R5AQ15172 486 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 POTEGQ6S5H5 508 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 PADI6Q6TGC4 694 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 COLGALT2Q8IYK4 626 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 BCL7CQ8WUZ0 217 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 MFSD14AQ96MC6 490 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 GAD1Q99259 594 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 MRPL17Q9NRX2 175 aaKnown RBP18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 LRWD1Q9UFC0 647 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 MUC6Q6W4X9 2439 aa18.45■□□□□ 0.54
TRAPPC1-201ENST00000303731 TECTAO75443 2155 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 B4GALT3O60512 393 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 URODP06132 367 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 CYP11B2P19099 503 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 AFF1P51825 1210 aaKnown RBP18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 ELMSAN1Q6PJG2 1045 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 VN1R3Q9BXE9 311 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 FZD8Q9H461 694 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 NXF3Q9H4D5 531 aaKnown RBP18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 GPRC5CQ9NQ84 441 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 DPP7Q9UHL4 492 aa18.44■□□□□ 0.54
TRAPPC1-201ENST00000303731 N4BP3O15049 544 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 B4GALT5O43286 388 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 CCT6AP40227 531 aaKnown RBP18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 NAMPTP43490 491 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 OR1G1P47890 313 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 ZXDAP98168 799 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 GRIK3Q13003 919 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 MAPK6Q16659 721 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 ATAT1Q5SQI0 421 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 KIAA1841Q6NSI8 718 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 MAEAQ7L5Y9 396 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 BMP8AQ7Z5Y6 402 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 CABP7Q86V35 215 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 C4orf32Q8N8J7 132 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 SLC22A17Q8WUG5 538 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 AUTS2Q8WXX7 1259 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 KIFAP3Q92845 792 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 HERC2P3Q9BVR0 1158 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 COLEC11Q9BWP8 271 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 APOL5Q9BWW9 433 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 RNF39Q9H2S5 420 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 SFXN1Q9H9B4 322 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 HES2Q9Y543 173 aa18.43■□□□□ 0.54
TRAPPC1-201ENST00000303731 ZNF318Q5VUA4 2279 aa18.42■□□□□ 0.54
TRAPPC1-201ENST00000303731 A0A087WWV3 80 aa18.42■□□□□ 0.54
TRAPPC1-201ENST00000303731 NPTXRO95502 500 aa18.42■□□□□ 0.54
TRAPPC1-201ENST00000303731 KLRC2P26717 231 aa18.42■□□□□ 0.54
TRAPPC1-201ENST00000303731 PRPHP41219 470 aa18.42■□□□□ 0.54
TRAPPC1-201ENST00000303731 SCNN1GP51170 649 aa18.42■□□□□ 0.54
TRAPPC1-201ENST00000303731 EFNA5P52803 228 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms