RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 LRRIQ3A6PVS8 624 aaPredicted RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 BUB1O43683 1085 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 EXTL3O43909 919 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 MAFO75444 373 aaPredicted RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 PALMO75781 387 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 TFRCP02786 760 aaKnown RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 GLRA2P23416 452 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 GJA5P36382 358 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 NAP1L1P55209 391 aaKnown RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 CELF3Q5SZQ8 465 aaKnown RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 MEI1Q5TIA1 1274 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 SLFN12LQ6IEE8 588 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 PLPPR4Q7Z2D5 763 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 ZSWIM2Q8NEG5 633 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 LNX1Q8TBB1 728 aaPredicted RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 CAGE1Q8TC20 777 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 ASAP3Q8TDY4 903 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 RUBCNQ92622 972 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 SLC10A4Q96EP9 437 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 EPC1Q9H2F5 836 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 AZI2Q9H6S1 392 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 ARFGAP3Q9NP61 516 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 NCANO14594 1321 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 ASB14A6NK59 587 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 SORBS3O60504 671 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 ZC3H11AO75152 810 aaKnown RBP eCLIP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 ERLIN1O75477 346 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 TCF7P36402 384 aaPredicted RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 SLC26A2P50443 739 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 CLDN10P78369 228 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 MMGT1Q8N4V1 131 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 NOA1Q8NC60 698 aaKnown RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 DEPTORQ8TB45 409 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 LMBR1Q8WVP7 490 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 SAAL1Q96ER3 474 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 BICD1Q96G01 975 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 GPR20Q99678 358 aa21.04■□□□□ 0.96
HOXC4-201ENST00000303406 UBE2TQ9NPD8 197 aaPredicted RBP21.04■□□□□ 0.96
HOXC4-201ENST00000303406 MYH10P35580 1976 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 GRID2IPA4D2P6 1211 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 ZNF233A6NK53 670 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 LDHAP00338 332 aaKnown RBP21.03■□□□□ 0.96
HOXC4-201ENST00000303406 TMEM253P0C7T8 217 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 LIG4P49917 911 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 FKBP1BP68106 108 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 EAPPQ56P03 285 aaPredicted RBP21.03■□□□□ 0.96
HOXC4-201ENST00000303406 CCDC62Q6P9F0 684 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 ARHGEF19Q8IW93 802 aa21.03■□□□□ 0.96
HOXC4-201ENST00000303406 FOXN3O00409 490 aaPredicted RBP21.02■□□□□ 0.96
HOXC4-201ENST00000303406 GRIN3BO60391 1043 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 TNFAIP3P21580 790 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 PAFAH1B1P43034 410 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 MFAP3P55082 362 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 CCNA1P78396 465 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 PSMD6Q15008 389 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 ARHGAP44Q17R89 818 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 IER5Q5VY09 327 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 ENOSF1Q7L5Y1 443 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 FBXL13Q8NEE6 735 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 U2AF1L4Q8WU68 220 aaKnown RBP21.02■□□□□ 0.96
HOXC4-201ENST00000303406 TCP11Q8WWU5 503 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 TMEM143Q96AN5 459 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 CAPZA3Q96KX2 299 aa21.02■□□□□ 0.96
HOXC4-201ENST00000303406 JPH2Q9BR39 696 aaPredicted RBP21.02■□□□□ 0.96
HOXC4-201ENST00000303406 PDE2AO00408 941 aaPredicted RBP21.01■□□□□ 0.95
HOXC4-201ENST00000303406 ZNF185O15231 689 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 ARIH2O95376 493 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 PGK2P07205 417 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 PNMA6AP0CW24 399 aaPredicted RBP21.01■□□□□ 0.95
HOXC4-201ENST00000303406 CETPP11597 493 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 TCEAL1Q15170 157 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 LY6KQ17RY6 165 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 NFRKBQ6P4R8 1299 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 C15orf39Q6ZRI6 1047 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 SLFN11Q7Z7L1 901 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 FAM71AQ8IYT1 594 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 SYCE1Q8N0S2 351 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 LRRC57Q8N9N7 239 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 ATP8B4Q8TF62 1192 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 PSPC1Q8WXF1 523 aaKnown RBP21.01■□□□□ 0.95
HOXC4-201ENST00000303406 PNKPQ96T60 521 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 AGPAT1Q99943 283 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 R3HDMLQ9H3Y0 253 aa21.01■□□□□ 0.95
HOXC4-201ENST00000303406 IGKV6-21A0A0C4DH24 114 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 K7ERI5 159 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 ADCY3O60266 1144 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 EFNA5P52803 228 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 MAP2K1Q02750 393 aaPredicted RBP21■□□□□ 0.95
HOXC4-201ENST00000303406 CCDC70Q6NSX1 233 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 ABRAQ8N0Z2 381 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 MSL3Q8N5Y2 521 aaKnown RBP21■□□□□ 0.95
HOXC4-201ENST00000303406 TPCN2Q8NHX9 752 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 COG1Q8WTW3 980 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 UBE2Q2Q8WVN8 375 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 SHC3Q92529 594 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 NT5C1BQ96P26 610 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 RAB20Q9NX57 234 aa21■□□□□ 0.95
HOXC4-201ENST00000303406 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
HOXC4-201ENST00000303406 GALCP54803 685 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms