RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 ETAA1Q9NY74 926 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 COL3A1P02461 1466 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ADAMTS13Q76LX8 1427 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PNMA8CA0A1B0GUJ8 204 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GYG2O15488 501 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 DIAPH2O60879 1101 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 NBNO60934 754 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 DNAJB5O75953 348 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GDF11O95390 407 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ADCY8P40145 1251 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 INPP5AQ14642 412 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SLC45A4Q5BKX6 768 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CDKAL1Q5VV42 579 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CYB5D1Q6P9G0 228 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 DHX40Q8IX18 779 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TMX1Q9H3N1 280 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TAB2Q9NYJ8 693 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 HPSEQ9Y251 543 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 STARD13Q9Y3M8 1113 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 IFT172Q9UG01 1749 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CLUHO75153 1309 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TLDC2A0PJX2 215 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PDLIM1O00151 329 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CHEK2O96017 543 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TAC1P20366 129 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 FECHP22830 423 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 EEF1B2P24534 225 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PPARAQ07869 468 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SCRN1Q12765 414 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 LACTB2Q53H82 288 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ALKBH5Q6P6C2 394 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TRIM50Q86XT4 487 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TEKT4Q8WW24 435 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 OSBPL8Q9BZF1 889 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 BRD8Q9H0E9 1235 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 COG4Q9H9E3 785 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 RXFP1Q9HBX9 757 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 EPB41L5Q9HCM4 733 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SETD1AO15047 1707 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ARHGEF35A5YM69 484 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 F6X3S4 739 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SERPINB6P35237 376 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 STK4Q13043 487 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 EIF2B5Q13144 721 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 HERC4Q5GLZ8 1057 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 RBM20Q5T481 1227 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 NAA35Q5VZE5 725 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TPTE2Q6XPS3 522 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ACAD11Q709F0 780 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MCPH1Q8NEM0 835 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GANCQ8TET4 914 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 FAXDC2Q96IV6 333 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SPATA17Q96L03 361 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 KLC2Q9H0B6 622 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SERTAD1Q9UHV2 236 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 EFR3BQ9Y2G0 817 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 C15orf41Q9Y2V0 281 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ZDHHC9Q9Y397 364 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TSPOAP1O95153 1857 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ARHGAP23Q9P227 1491 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CCDC189A1A4V9 331 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 HGSO14964 777 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 BUB1O43683 1085 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CSDE1O75534 798 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ABL1P00519 1130 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 KRT6AP02538 564 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 KRT6BP04259 564 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GPTP24298 496 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CAPZA2P47755 286 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 GCLCP48506 637 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 JAK3P52333 1124 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 NRG3P56975 720 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ITKQ08881 620 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 XRCC4Q13426 336 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 DCTN2Q13561 401 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 RASA2Q15283 850 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 P3H1Q32P28 736 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 FAM47CQ5HY64 1035 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SNX30Q5VWJ9 437 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 DCUN1D2Q6PH85 259 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 C11orf57Q6ZUT1 292 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 RSAD2Q8WXG1 361 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 FAM167AQ96KS9 214 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 TMEM237Q96Q45 408 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 NUDCD1Q96RS6 583 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 CCT7Q99832 543 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MAGEB5Q9BZ81 275 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ZNF518BQ9C0D4 1074 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 FAM83GA6ND36 823 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PSTPIP1O43586 416 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 NPTXRO95502 500 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 ERBB2P04626 1255 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 LDHBP07195 334 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 MAPTP10636 758 aaKnown RBP5.55□□□□□ -1.52
SCN1A-201ENST00000303395 OCRLQ01968 901 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 LRMPQ12912 555 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SGSM1Q2NKQ1 1148 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 SZRD1Q7Z422 152 aa5.55□□□□□ -1.52
SCN1A-201ENST00000303395 PROSER2Q86WR7 435 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms