RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TAPT1Q6NXT6 567 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 TRAPPC12Q8WVT3 735 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 NLRP4Q96MN2 994 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 MSTO1Q9BUK6 570 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 TARS2Q9BW92 718 aaKnown RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 STK33Q9BYT3 514 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 LACRTQ9GZZ8 138 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 SIX2Q9NPC8 291 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 UBE2TQ9NPD8 197 aaPredicted RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■■ 88.9
SHCBP1-201ENST00000303383 KIAA0391O15091 583 aaKnown RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 ADCY3O60266 1144 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 LGALS2P05162 132 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 TNNI1P19237 187 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 RFX1P22670 979 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 SLC39A4Q6P5W5 647 aa15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 SEPT11Q9NVA2 429 aaKnown RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 ABT1Q9ULW3 272 aaKnown RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 V9GYY5 206 aaPredicted RBP15.74■□□□□ 0.11
SHCBP1-201ENST00000303383 LDHAP00338 332 aaKnown RBP15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 LAMTOR4Q0VGL1 99 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 ACVR2BQ13705 512 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 SLC18A3Q16572 532 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 EFCAB12Q6NXP0 572 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 TAS1R3Q7RTX0 852 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 OR6J1Q8NGC5 347 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 PARD3BQ8TEW8 1205 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 CARD6Q9BX69 1037 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 DAAM1Q9Y4D1 1078 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 EXTL3O43909 919 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 SOX5P35711 763 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 CYP24A1Q07973 514 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 DRP2Q13474 957 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 MAPK6Q16659 721 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 TMC2Q8TDI7 906 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 C2orf40Q9H1Z8 148 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 TMEM134Q9H6X4 195 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 IGF2BP3O00425 579 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF263O14978 683 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 LRRN2O75325 713 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 SNAI1O95863 264 aaPredicted RBP15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 PTK2Q05397 1052 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 PPM1KQ8N3J5 372 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 PPTC7Q8NI37 304 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 SCLT1Q96NL6 688 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 TMEM117Q9H0C3 514 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 PRDM4Q9UKN5 801 aa15.73■□□□□ 0.11
SHCBP1-201ENST00000303383 INO80B-WBP1J3KQ70 363 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 CLDN3O15551 220 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 PNMA6AP0CW24 399 aaPredicted RBP15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 ACOT2P49753 483 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 MAMDC4Q6UXC1 1216 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF662Q6ZS27 426 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF668Q96K58 619 aaPredicted RBP15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 CEP89Q96ST8 783 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 POP1Q99575 1024 aaKnown RBP15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 MRPL4Q9BYD3 311 aaKnown RBP15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 INO80BQ9C086 356 aaPredicted RBP15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 TMEM8AQ9HCN3 771 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 PLXNA1Q9UIW2 1896 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 RCCD1A6NED2 376 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 LRRC37A2A6NM11 1700 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF286BP0CG31 522 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 ZNF484Q5JVG2 852 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 SAPCD2Q86UD0 394 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 VTI1AQ96AJ9 217 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 ZFYVE28Q9HCC9 887 aa15.72■□□□□ 0.11
SHCBP1-201ENST00000303383 LRRIQ3A6PVS8 624 aaPredicted RBP15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 CTIFO43310 598 aaKnown RBP15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 TMOD1P28289 359 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 CLCN3P51790 818 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 BIRC3Q13489 604 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 TUBB2AQ13885 445 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 TRIM58Q8NG06 486 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 UBXN4Q92575 508 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 TUBB2BQ9BVA1 445 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 RNPEPQ9H4A4 650 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 DUSP10Q9Y6W6 482 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 A0A087X0T9 212 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 F8VZ95 297 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 EVI5O60447 810 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 PPFIA4O75335 1185 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 LCA5LO95447 670 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 PRKCBP05771 671 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 FAM228BP0C875 321 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 INSRRP14616 1297 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 INHBEP58166 350 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 KIAA0753Q2KHM9 967 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 IRF2BP2Q7Z5L9 587 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 FBXL13Q8NEE6 735 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 NPLOC4Q8TAT6 608 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 MFSD14AQ96MC6 490 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 AKT3Q9Y243 479 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 FANCGO15287 622 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 TNFAIP2Q03169 654 aa15.71■□□□□ 0.11
SHCBP1-201ENST00000303383 MAP2K5Q13163 448 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms