RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 AGPAT3Q9NRZ7 376 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 ANO10Q9NW15 660 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 TNFSF13BQ9Y275 285 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 TANC1Q9C0D5 1861 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 A0A0B4J269 797 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 CCDC192P0DO97 292 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 ERCC5P28715 1186 aaPredicted RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 STX17P56962 302 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 MCCD1P59942 119 aaPredicted RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 PRPF4BQ13523 1007 aaKnown RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 PCBP1Q15365 356 aaKnown RBP eCLIP10.4□□□□□ -0.74
RFX3-201ENST00000302303 NFIL3Q16649 462 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 CT47A1Q5JQC4 288 aaPredicted RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 KLHL10Q6JEL2 608 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 MFSD5Q6N075 450 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 CRELD2Q6UXH1 353 aaPredicted RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 LRRC55Q6ZSA7 311 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 C12orf56Q8IXR9 622 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 CRIPAKQ8N1N5 446 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 USP38Q8NB14 1042 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 DBF4BQ8NFT6 615 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 NELFBQ8WX92 580 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 CBWD1Q9BRT8 395 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 MRPL4Q9BYD3 311 aaKnown RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 GBP3Q9H0R5 595 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 RNF39Q9H2S5 420 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 TMEM206Q9H813 350 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 TYW1Q9NV66 732 aaKnown RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 RWDD2AQ9UIY3 292 aa10.4□□□□□ -0.74
RFX3-201ENST00000302303 LAMA2P24043 3122 aaKnown RBP10.4□□□□□ -0.74
RFX3-201ENST00000302303 M0QZ92 97 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 CLIC2O15247 247 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 TOM1L1O75674 476 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 CSF2RAP15509 400 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 ABCD1P33897 745 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 RGS19P49795 217 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 EPHB4P54760 987 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 WNT7BP56706 349 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 MCL1Q07820 350 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 NFX1Q12986 1120 aaKnown RBP10.39□□□□□ -0.75
RFX3-201ENST00000302303 STRN3Q13033 797 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 PAK1Q13153 545 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 ZBTB41Q5SVQ8 909 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 ATF7IP2Q5U623 682 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 CATSPER4Q7RTX7 472 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 SLC9A9Q8IVB4 645 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 DHX40Q8IX18 779 aaKnown RBP10.39□□□□□ -0.75
RFX3-201ENST00000302303 C7orf61Q8IZ16 206 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 CCDC155Q8N6L0 562 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 CEP120Q8N960 986 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 EEF2KMTQ96G04 330 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 BORCS6Q96GS4 357 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 FBXL18Q96ME1 805 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 SCLT1Q96NL6 688 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 EIF2AQ9BY44 585 aaKnown RBP10.39□□□□□ -0.75
RFX3-201ENST00000302303 CDT1Q9H211 546 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 CTNND2Q9UQB3 1225 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 LTBP2Q14767 1821 aa10.39□□□□□ -0.75
RFX3-201ENST00000302303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 PSMA7O14818 248 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 HNRNPDLO14979 420 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 GPR182O15218 404 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 ATF7P17544 494 aaPredicted RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 SYN1P17600 705 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 SFPQP23246 707 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■■□□ 15.1
RFX3-201ENST00000302303 AXLP30530 894 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 PPP1R2P41236 205 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 CASP4P49662 377 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 FAM189BP81408 668 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 EDRF1Q3B7T1 1238 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 STXBP4Q6ZWJ1 553 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 TMEM192Q8IY95 271 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 SMG8Q8ND04 991 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 ENOX1Q8TC92 643 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 BADQ92934 168 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 BPIFA3Q9BQP9 254 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 IFIH1Q9BYX4 1025 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 PCIF1Q9H4Z3 704 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 CBX8Q9HC52 389 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 PRDM5Q9NQX1 630 aaPredicted RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 CHST12Q9NRB3 414 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 MEIS3P2A8K0S8 358 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 C9IYK1 514 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 ENPP3O14638 875 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 EVI5O60447 810 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 ERLIN2O94905 339 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 PARNO95453 639 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 NR3C1P04150 777 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 RAG1P15918 1043 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 GARTP22102 1010 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 TNFSF9P41273 254 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 ZNF165P49910 485 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 LIG4P49917 911 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 SNRPFP62306 86 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 LRRC63Q05C16 580 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 PAK2Q13177 524 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 SEZ6Q53EL9 994 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 MPZL3Q6UWV2 235 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms