RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 GAP43P17677 238 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 MAPK7Q13164 816 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 TRPC3Q13507 836 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 IZUMO3Q5VZ72 239 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 ELMO3Q96BJ8 720 aa12.97□□□□□ -0.33
PDGFD-201ENST00000302251 SUCLA2Q9P2R7 463 aaPredicted RBP12.97□□□□□ -0.33
PDGFD-201ENST00000302251 POLR2MP0CAP2 368 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 RASA1P20936 1047 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 ALDH5A1P51649 535 aaPredicted RBP12.96□□□□□ -0.33
PDGFD-201ENST00000302251 KLC1Q07866 573 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 GRAMD1BQ3KR37 738 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 CCDC124Q96CT7 223 aaKnown RBP12.96□□□□□ -0.33
PDGFD-201ENST00000302251 TMEM237Q96Q45 408 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 ADAMTS3O15072 1205 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 CYTH3O43739 400 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 PHF2O75151 1096 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 ALAS1P13196 640 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 CD58P19256 250 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 GPS1Q13098 491 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 TBC1D22AQ8WUA7 517 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 NACC1Q96RE7 527 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 TRIM55Q9BYV6 548 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 ANKFY1Q9P2R3 1169 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 TRIM33Q9UPN9 1127 aa12.96□□□□□ -0.33
PDGFD-201ENST00000302251 FOXN3O00409 490 aaPredicted RBP12.96□□□□□ -0.34
PDGFD-201ENST00000302251 AKAP3O75969 853 aa12.96□□□□□ -0.34
PDGFD-201ENST00000302251 HAUS5O94927 633 aa12.96□□□□□ -0.34
PDGFD-201ENST00000302251 UBTFL6P0CB48 400 aaPredicted RBP12.96□□□□□ -0.34
PDGFD-201ENST00000302251 CALN1Q9BXU9 219 aa12.96□□□□□ -0.34
PDGFD-201ENST00000302251 OSBPL7Q9BZF2 842 aa12.96□□□□□ -0.34
PDGFD-201ENST00000302251 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.34
PDGFD-201ENST00000302251 SAT1P21673 171 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 FMO5P49326 533 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 KDSRQ06136 332 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 LGSNQ5TDP6 509 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 SCFD1Q8WVM8 642 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 TRABDQ9H4I3 376 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 MAGED2Q9UNF1 606 aaPredicted RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 CCDC195A0A1B0GUA6 201 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 PPP1R12AO14974 1030 aaPredicted RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 DNAJC9Q8WXX5 260 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 TATDN2Q93075 761 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 RBM15Q96T37 977 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 ATP6V0A4Q9HBG4 840 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 IL17RBQ9NRM6 502 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 MARCOQ9UEW3 520 aaPredicted RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 DIS3Q9Y2L1 958 aaKnown RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 H7C0C1 242 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 TOM1L1O75674 476 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 CPP00450 1065 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 CYP11B2P19099 503 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 ATP5OP48047 213 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 PDIA2Q13087 525 aaKnown RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 SPATA24Q86W54 205 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
PDGFD-201ENST00000302251 FGD4Q96M96 766 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 STK33Q9BYT3 514 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 BLOC1S4Q9NUP1 217 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 KCPQ6ZWJ8 1503 aa12.95□□□□□ -0.34
PDGFD-201ENST00000302251 PDXKO00764 312 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 FOSP01100 380 aaPredicted RBP12.94□□□□□ -0.34
PDGFD-201ENST00000302251 ZCCHC18P0CG32 403 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 LIG4P49917 911 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 ITGA8P53708 1063 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 KIF22Q14807 665 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 OGFOD1Q8N543 542 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 SPIRE2Q8WWL2 714 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 PNMA5Q96PV4 448 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 C15orf41Q9Y2V0 281 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 UBAP1LF5GYI3 381 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 ARFIP2P53365 341 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 SLC8A3P57103 927 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 TMPRSS15P98073 1019 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDGFD-201ENST00000302251 BAP1Q92560 729 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 NAF1Q96HR8 494 aaKnown RBP12.94□□□□□ -0.34
PDGFD-201ENST00000302251 EIF2AK1Q9BQI3 630 aaKnown RBP12.94□□□□□ -0.34
PDGFD-201ENST00000302251 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 SLC13A1Q9BZW2 595 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 ZWILCHQ9H900 591 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 IFT122Q9HBG6 1241 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 CYP4F11Q9HBI6 524 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 SLC16A4O15374 487 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 CDH16O75309 829 aa12.94□□□□□ -0.34
PDGFD-201ENST00000302251 VAMP7P51809 220 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms