RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 C2CD6Q53TS8 623 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 NOL9Q5SY16 702 aaKnown RBP15.77■□□□□ 0.12
SMG8-201ENST00000300917 MEI1Q5TIA1 1274 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 C8orf74Q6P047 294 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 HDXQ7Z353 690 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 LRRC71Q8N4P6 559 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 SLC35G2Q8TBE7 412 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 TRAPPC12Q8WVT3 735 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 CDHR1Q96JP9 859 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 TARS2Q9BW92 718 aaKnown RBP15.77■□□□□ 0.12
SMG8-201ENST00000300917 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
SMG8-201ENST00000300917 MAFGO15525 162 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 ARIH2O95376 493 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 GJB1P08034 283 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 TNNI1P19237 187 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 XKR3Q5GH77 459 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 XRRA1Q6P2D8 792 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 FBXO16Q8IX29 292 aaPredicted RBP15.77■□□□□ 0.11
SMG8-201ENST00000300917 TPCN2Q8NHX9 752 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 PARD3BQ8TEW8 1205 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 CTNNBL1Q8WYA6 563 aaPredicted RBP15.77■□□□□ 0.11
SMG8-201ENST00000300917 OPTNQ96CV9 577 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 FAM53CQ9NYF3 392 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 ZHX1Q9UKY1 873 aaPredicted RBP15.77■□□□□ 0.11
SMG8-201ENST00000300917 PCDHGC5Q9Y5F6 944 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.11
SMG8-201ENST00000300917 SRGAP2CP0DJJ0 459 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 ALCAMQ13740 583 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 SPOPLQ6IQ16 392 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 KREMEN1Q96MU8 473 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 KIAA1217Q5T5P2 1943 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 SYNGAP1Q96PV0 1343 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 TTLL13PA6NNM8 815 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 BUB1BO60566 1050 aaPredicted RBP15.76■□□□□ 0.11
SMG8-201ENST00000300917 TCF7P36402 384 aaPredicted RBP15.76■□□□□ 0.11
SMG8-201ENST00000300917 ZNF211Q13398 564 aaPredicted RBP15.76■□□□□ 0.11
SMG8-201ENST00000300917 BIRC3Q13489 604 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 SCARA3Q6AZY7 606 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 CCDC70Q6NSX1 233 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 ZBTB33Q86T24 672 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 CHST13Q8NET6 341 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 DEPTORQ8TB45 409 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 ATP2A1O14983 1001 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 OATP04181 439 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 POTEJP0CG39 1038 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 COPB2P35606 906 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 NLRP11P59045 1033 aaKnown RBP15.76■□□□□ 0.11
SMG8-201ENST00000300917 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 SV2AQ7L0J3 742 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 SAMD3Q8N6K7 520 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 MCPH1Q8NEM0 835 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 SLC30A5Q8TAD4 765 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 SLC7A3Q8WY07 619 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 TCHPQ9BT92 498 aa15.76■□□□□ 0.11
SMG8-201ENST00000300917 FTLP02792 175 aaPredicted RBP15.75■□□□□ 0.11
SMG8-201ENST00000300917 SH3D19Q5HYK7 790 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 SND1Q7KZF4 910 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMG8-201ENST00000300917 OLIG1Q8TAK6 271 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 BTBD6Q96KE9 485 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 IWS1Q96ST2 819 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 GSTTP1A0A1W2PQM5 241 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
SMG8-201ENST00000300917 KIF4AO95239 1232 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 MMEP08473 750 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 GLRA2P23416 452 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 NF2P35240 595 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 PPARDQ03181 441 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 CPNE8Q86YQ8 564 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 PCYT2Q99447 389 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 PDGFCQ9NRA1 345 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 VPS18Q9P253 973 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 CTTNBP2NLQ9P2B4 639 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 FBXO40Q9UH90 709 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 FBXL5Q9UKA1 691 aa15.75■□□□□ 0.11
SMG8-201ENST00000300917 RLFQ13129 1914 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 K7ERI5 159 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 EDN1P05305 212 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 STAT5BP51692 787 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 IGBP1P78318 339 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 GUCY2DQ02846 1103 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 STRN3Q13033 797 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 KRT39Q6A163 491 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 NOP9Q86U38 636 aaKnown RBP15.74■□□□□ 0.11
SMG8-201ENST00000300917 RIOX2Q8IUF8 465 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 METTL13Q8N6R0 699 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 EFCC1Q9HA90 598 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 DNAH12Q6ZR08 3092 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 NOP56O00567 594 aaKnown RBP15.74■□□□□ 0.11
SMG8-201ENST00000300917 FARP2O94887 1054 aaPredicted RBP15.74■□□□□ 0.11
SMG8-201ENST00000300917 GLI1P08151 1106 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 OSTNP61366 133 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 AADACL2Q6P093 401 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 ERO1BQ86YB8 467 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 ANKRD13AQ8IZ07 590 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 RDM1Q8NG50 284 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 PPP1R13LQ8WUF5 828 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 RPGRIP1Q96KN7 1286 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 PCDHB18PQ96TA0 734 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 EPHX2P34913 555 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms