RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ATP4AP20648 1035 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 EPHB2P29323 1055 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 PSMC2P35998 433 aaKnown RBP15.73■□□□□ 0.11
COL6A2-201ENST00000300527 MGAT5Q09328 741 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 RBBP5Q15291 538 aaKnown RBP15.73■□□□□ 0.11
COL6A2-201ENST00000300527 RFX8Q6ZV50 586 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ZSWIM1Q9BR11 485 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 STK33Q9BYT3 514 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ANO3Q9BYT9 981 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 FRMD4BQ9Y2L6 1034 aa15.73■□□□□ 0.11
COL6A2-201ENST00000300527 ANKRD62A6NC57 917 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 FAM196BA6NMK8 535 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 PDXKO00764 312 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 LUC7L3O95232 432 aaKnown RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 BRD2P25440 801 aaKnown RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 TUBP50607 506 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 BLMHQ13867 455 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 RRP1BQ14684 758 aaKnown RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 C16orf86Q6ZW13 317 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 TBC1D16Q8TBP0 767 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 KAT5Q92993 513 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 RUNDC3BQ96NL0 473 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 RAB3IPQ96QF0 476 aaPredicted RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 PIDD1Q9HB75 910 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 ARHGEF3Q9NR81 526 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 METTL5Q9NRN9 209 aaKnown RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 CALCAP01258 141 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 HOXA13P31271 388 aaPredicted RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 ZNF142P52746 1687 aaPredicted RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 NUP98P52948 1817 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 NPEPPSP55786 919 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 NFIXQ14938 502 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 CDCA2Q69YH5 1023 aaPredicted RBP15.72■□□□□ 0.11
COL6A2-201ENST00000300527 TMEM154Q6P9G4 183 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 HS2ST1Q7LGA3 356 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 CYP2W1Q8TAV3 490 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 SETDB2Q96T68 719 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 AGPAT1Q99943 283 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 KCNMB3Q9NPA1 279 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 TRAF3IP3Q9Y228 551 aa15.72■□□□□ 0.11
COL6A2-201ENST00000300527 RASA4BC9J798 803 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 RASA4O43374 803 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 NEFHP12036 1026 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 UBXN2AP68543 259 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 C4orf33Q8N1A6 199 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 SLC30A5Q8TAD4 765 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 MTMR4Q9NYA4 1195 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 DLGAP2Q9P1A6 1054 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 KIF3CO14782 793 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 KCNQ2O43526 872 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 ORC2Q13416 577 aaPredicted RBP15.71■□□□□ 0.11
COL6A2-201ENST00000300527 C2CD6Q53TS8 623 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 DAB2IPQ5VWQ8 1189 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 CNOT7Q9UIV1 285 aaKnown RBP15.71■□□□□ 0.11
COL6A2-201ENST00000300527 CORO1CQ9ULV4 474 aaPredicted RBP15.71■□□□□ 0.11
COL6A2-201ENST00000300527 RABGAP1Q9Y3P9 1069 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 GCLMP48507 274 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 ITGA8P53708 1063 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 SLC30A9Q6PML9 568 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 CROCCP2Q86T23 111 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 SLC13A5Q86YT5 568 aaPredicted RBP15.71■□□□□ 0.11
COL6A2-201ENST00000300527 CKAP2Q8WWK9 683 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 DCTN4Q9UJW0 460 aa15.71■□□□□ 0.11
COL6A2-201ENST00000300527 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.71■□□□□ 0.11
COL6A2-201ENST00000300527 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 KRT15P19012 456 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 FOXN2P32314 431 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 MTM1Q13496 603 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 GALNTL6Q49A17 601 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 ASPRV1Q53RT3 343 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 TAB3Q8N5C8 712 aaPredicted RBP15.7■□□□□ 0.1
COL6A2-201ENST00000300527 SUPT20HQ8NEM7 779 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 DTX3LQ8TDB6 740 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 ZNF653Q96CK0 615 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 LRRC37BQ96QE4 947 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 RPS6KC1Q96S38 1066 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 PKD2L1Q9P0L9 805 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 TISP43B9A030 160 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 MAP3K13O43283 966 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 PIAS1O75925 651 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 ARMC3Q5W041 872 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 EPM2AIP1Q7L775 607 aaPredicted RBP15.7■□□□□ 0.1
COL6A2-201ENST00000300527 APBB1IPQ7Z5R6 666 aaPredicted RBP15.7■□□□□ 0.1
COL6A2-201ENST00000300527 TEKT4Q8WW24 435 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 UTP4Q969X6 686 aaKnown RBP15.7■□□□□ 0.1
COL6A2-201ENST00000300527 KIAA1683Q9H0B3 1180 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 CHST7Q9NS84 486 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 TXLNGQ9NUQ3 528 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 ANAPC5Q9UJX4 755 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 TGFB1I1O43294 461 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 ATP5DP30049 168 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 MFSD14BQ5SR56 506 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 PHLDB3Q6NSJ2 640 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 EGFL6Q8IUX8 553 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 PPM1KQ8N3J5 372 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 NUP85Q9BW27 656 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 APEX2Q9UBZ4 518 aa15.7■□□□□ 0.1
COL6A2-201ENST00000300527 TTC7AQ9ULT0 858 aaPredicted RBP15.7■□□□□ 0.1
COL6A2-201ENST00000300527 DIS3Q9Y2L1 958 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms