RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SMIM35A0A1B0GVV1 85 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 KIAA0355O15063 1070 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
SSX3-201ENST00000298396 GPR32O75388 356 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
SSX3-201ENST00000298396 CHRNA1P02708 482 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 VTNP04004 478 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 EDN1P05305 212 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 CLTBP09497 229 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 CKBP12277 381 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 CYP11B2P19099 503 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 CYP2C18P33260 490 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 ARL2P36404 184 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 SMTNP53814 917 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 RAD51AP2Q09MP3 1159 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 TBC1D8BQ0IIM8 1120 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 TMEM62Q0P6H9 643 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 LONRF3Q496Y0 759 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 ZNF618Q5T7W0 954 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 TMEM164Q5U3C3 297 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 EFCAB12Q6NXP0 572 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 RPAINQ86UA6 219 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 SYT2Q8N9I0 419 aaPredicted RBP6.55□□□□□ -1.36
SSX3-201ENST00000298396 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
SSX3-201ENST00000298396 TMEM40Q8WWA1 233 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 DNAJB3Q8WWF6 145 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 MRPS27Q92552 414 aaKnown RBP6.55□□□□□ -1.36
SSX3-201ENST00000298396 LARP4BQ92615 738 aaKnown RBP6.55□□□□□ -1.36
SSX3-201ENST00000298396 STAMQ92783 540 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 CLP1Q92989 425 aaKnown RBP6.55□□□□□ -1.36
SSX3-201ENST00000298396 DHX58Q96C10 678 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 DNAJC19Q96DA6 116 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 CALML4Q96GE6 196 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 ZNF668Q96K58 619 aaPredicted RBP6.55□□□□□ -1.36
SSX3-201ENST00000298396 PPP1R16BQ96T49 567 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 SEZ6LQ9BYH1 1024 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 NT5C3AQ9H0P0 336 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 ADAMTS10Q9H324 1103 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 MINDY3Q9H8M7 445 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 ATP6V0A4Q9HBG4 840 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 KBTBD4Q9NVX7 518 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 STK17AQ9UEE5 414 aa6.55□□□□□ -1.36
SSX3-201ENST00000298396 FRMD3A2A2Y4 597 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 ARHGEF35A5YM69 484 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 A6NJY4 79 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 SFI1A8K8P3 1242 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 DCDC2CA8MYV0 355 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 MAGEB2O15479 319 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 KLRC4O43908 158 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 DKC1O60832 514 aaKnown RBP eCLIP6.54□□□□□ -1.36
SSX3-201ENST00000298396 NBNO60934 754 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 HIP1RO75146 1068 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 UPP2O95045 317 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 ZNF202O95125 648 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 CTSHP09668 335 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 SLFN14P0C7P3 912 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 SYN1P17600 705 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 GLRA2P23416 452 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 GUCY2CP25092 1073 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 THPOP40225 353 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 STAT6P42226 847 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 CTSOP43234 321 aaPredicted RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 GPC3P51654 580 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 POLGP54098 1239 aaPredicted RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 EPHB4P54760 987 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 MRPS6P82932 125 aaKnown RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 CENPCQ03188 943 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 LAMTOR4Q0VGL1 99 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 CAPSQ13938 189 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 GIT2Q14161 759 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 DHX8Q14562 1220 aaKnown RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 FAM26DQ5JW98 314 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 RRAGBQ5VZM2 374 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 CCDC73Q6ZRK6 1079 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 MAEAQ7L5Y9 396 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 OTUD6AQ7L8S5 288 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 TAS1R3Q7RTX0 852 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 GPBP1Q86WP2 473 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 METTL13Q8N6R0 699 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 RETREG2Q8NC44 543 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 RNF217Q8TC41 542 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 FAM200AQ8TCP9 573 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 GPT2Q8TD30 523 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 PRPF31Q8WWY3 499 aaKnown RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 PAGE5Q96GU1 130 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 SCLYQ96I15 445 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 CDK5RAP3Q96JB5 506 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 ZFP42Q96MM3 310 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 FIZ1Q96SL8 496 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 INSM2Q96T92 566 aaPredicted RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 REEP2Q9BRK0 252 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 FGFBP2Q9BYJ0 223 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 POLR3FQ9H1D9 316 aaPredicted RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 HIPK3Q9H422 1215 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 ZNF395Q9H8N7 513 aaPredicted RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 SUGCTQ9HAC7 445 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 IFT122Q9HBG6 1241 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 RAB6BQ9NRW1 208 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 SCHIP1Q9P0W5 487 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms