RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 KREMEN1Q96MU8 473 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 PCDHB18PQ96TA0 734 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 PXMP2Q9NR77 195 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 ALG6Q9Y672 507 aa21.35■■□□□ 1.01
NFIL3-201ENST00000297689 PFASO15067 1338 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 SLC16A4O15374 487 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 DAPK3O43293 454 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 GZMAP12544 262 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 SFNP31947 248 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 FLT3P36888 993 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 JAK3P52333 1124 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 PEX3P56589 373 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 EPS8L1Q8TE68 723 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 NTPCRQ9BSD7 190 aaKnown RBP21.34■■□□□ 1.01
NFIL3-201ENST00000297689 PHIPQ8WWQ0 1821 aa21.34■■□□□ 1.01
NFIL3-201ENST00000297689 WDR64B1ANS9 1081 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 HMGB1P1B2RPK0 211 aaPredicted RBP21.33■■□□□ 1.01
NFIL3-201ENST00000297689 ANKRD63C9JTQ0 380 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 PPP2R5EQ16537 467 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 MAP4K3Q8IVH8 894 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 ATP8B4Q8TF62 1192 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 SHC3Q92529 594 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 HVCN1Q96D96 273 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 WNK4Q96J92 1243 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 FBXL18Q96ME1 805 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 SENP7Q9BQF6 1050 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 CELF4Q9BZC1 486 aaKnown RBP21.33■■□□□ 1.01
NFIL3-201ENST00000297689 PNMA2Q9UL42 364 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 RLFQ13129 1914 aa21.33■■□□□ 1.01
NFIL3-201ENST00000297689 RTN2O75298 545 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 MXI1P50539 228 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 KRT76Q01546 638 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 DCAF15Q66K64 600 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 ANO5Q75V66 913 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 RPUSD2Q8IZ73 545 aaKnown RBP21.33■■□□□ 1
NFIL3-201ENST00000297689 RDM1Q8NG50 284 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 SEMA4DQ92854 862 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 RMDN3Q96TC7 470 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 TXLNGYQ9BZA5 131 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 FAM114A2Q9NRY5 505 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 HOMER2Q9NSB8 354 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 TBX20Q9UMR3 447 aa21.33■■□□□ 1
NFIL3-201ENST00000297689 TRIM66O15016 1216 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 ZEB2O60315 1214 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 STBD1O95210 358 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 SGPL1O95470 568 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 PTPRAP18433 802 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 GPC5P78333 572 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 DNAJC21Q5F1R6 531 aaKnown RBP21.32■■□□□ 1
NFIL3-201ENST00000297689 NOP9Q86U38 636 aaKnown RBP21.32■■□□□ 1
NFIL3-201ENST00000297689 CBWD2Q8IUF1 395 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 PARD3BQ8TEW8 1205 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 RPS6KC1Q96S38 1066 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 NAP1L3Q99457 506 aaPredicted RBP21.32■■□□□ 1
NFIL3-201ENST00000297689 TSPYL1Q9H0U9 437 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 ERVK-5Q9HDB9 667 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 WDR81Q562E7 1941 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 MIF4GDA9UHW6 222 aaKnown RBP21.32■■□□□ 1
NFIL3-201ENST00000297689 FDX1P10109 184 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 NPTX2P47972 431 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 PEX5P50542 639 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 BACE1P56817 501 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 CORO7P57737 925 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 CLUL1Q15846 466 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 DUPD1Q68J44 220 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 XRRA1Q6P2D8 792 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 TMC3Q7Z5M5 1100 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 WRNIP1Q96S55 665 aa21.32■■□□□ 1
NFIL3-201ENST00000297689 SBF1O95248 1867 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 SSC5DA1L4H1 1573 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 NR1D1P20393 614 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 HIRAP54198 1017 aaPredicted RBP21.31■■□□□ 1
NFIL3-201ENST00000297689 SNRNP35Q16560 246 aaKnown RBP21.31■■□□□ 1
NFIL3-201ENST00000297689 CEP85LQ5SZL2 805 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 PLA2G4FQ68DD2 849 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 VSIG10LQ86VR7 867 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 APOBEC3FQ8IUX4 373 aaKnown RBP21.31■■□□□ 1
NFIL3-201ENST00000297689 HELQQ8TDG4 1101 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 BCAS4Q8TDM0 211 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 SPIRE2Q8WWL2 714 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 CD101Q93033 1021 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 SEPT11Q9NVA2 429 aaKnown RBP21.31■■□□□ 1
NFIL3-201ENST00000297689 GPRC5DQ9NZD1 345 aa21.31■■□□□ 1
NFIL3-201ENST00000297689 DICER1Q9UPY3 1922 aaKnown RBP21.31■■□□□ 1
NFIL3-201ENST00000297689 COL11A1P12107 1806 aaPredicted RBP21.31■■□□□ 1
NFIL3-201ENST00000297689 VWA5AO00534 786 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 CNGA1P29973 690 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 GPC3P51654 580 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 DRG2P55039 364 aaKnown RBP21.3■■□□□ 1
NFIL3-201ENST00000297689 ZNF844Q08AG5 666 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 PDCLQ13371 301 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 XKR9Q5GH70 373 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 ZNF746Q6NUN9 644 aaPredicted RBP21.3■■□□□ 1
NFIL3-201ENST00000297689 SLC39A4Q6P5W5 647 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 RNF207Q6ZRF8 634 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 TMC2Q8TDI7 906 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 ATG4CQ96DT6 458 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 MFSD14AQ96MC6 490 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 PDLIM7Q9NR12 457 aa21.3■■□□□ 1
NFIL3-201ENST00000297689 GOLGA8IPA6NC78 632 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms