RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TBX10O75333 385 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 GNA14O95837 355 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 TAC1P20366 129 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 CHKAP35790 457 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 RTP1P59025 263 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 MTM1Q13496 603 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 RRP1BQ14684 758 aaKnown RBP10.89□□□□□ -0.67
CLDN1-201ENST00000295522 DDB1Q16531 1140 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 CGB2Q6NT52 195 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 NSMFQ6X4W1 530 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 NLRP9Q7RTR0 991 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 RBM46Q8TBY0 533 aaKnown RBP10.89□□□□□ -0.67
CLDN1-201ENST00000295522 JDP2Q8WYK2 163 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 HAUS1Q96CS2 278 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 DYNLL2Q96FJ2 89 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 MAGEB18Q96M61 343 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 TUBGCP5Q96RT8 1024 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 GRHL1Q9NZI5 618 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 LARSQ9P2J5 1176 aaKnown RBP10.89□□□□□ -0.67
CLDN1-201ENST00000295522 PDP2Q9P2J9 529 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 KIAA1024Q9UPX6 916 aa10.89□□□□□ -0.67
CLDN1-201ENST00000295522 PODXLO00592 558 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 CES2O00748 559 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ABLIM1O14639 778 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PIAS1O75925 651 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 STK10O94804 968 aaKnown RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 TSPY3P0CV98 308 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 TSPY8P0CW00 308 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ESRRAP11474 423 aaPredicted RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 IMPDH2P12268 514 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 CHRNA3P32297 505 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 CCNG1P51959 295 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PPP2R5EQ16537 467 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ZCWPW2Q504Y3 356 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 RNF43Q68DV7 783 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 TTC27Q6P3X3 843 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 GSTA5Q7RTV2 222 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PHLDB2Q86SQ0 1253 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 SDCCAG8Q86SQ7 713 aaPredicted RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ST13P4Q8IZP2 240 aaPredicted RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ATG4AQ8WYN0 398 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 BTBD6Q96KE9 485 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 NAALADL1Q9UQQ1 740 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ALG6Q9Y672 507 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 EXOC1LA0A1B0GW35 172 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 GOLGA8RI6L899 631 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 SPATA31D3P0C874 917 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 KRT17Q04695 432 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 BTKQ06187 659 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 SLC34A1Q06495 639 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PARP6Q2NL67 630 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ACSBG2Q5FVE4 666 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 WASHC2DQ5SRD0 308 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 BTNL9Q6UXG8 535 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 SPATA31D4Q6ZUB0 917 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 SPATA24Q86W54 205 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 MAP7D3Q8IWC1 876 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 REXO1Q8N1G1 1221 aaKnown RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 TAB3Q8N5C8 712 aaPredicted RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PRELID2Q8N945 189 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ANKLE1Q8NAG6 615 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 RFFLQ8WZ73 363 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 HES6Q96HZ4 224 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 CLMNQ96JQ2 1002 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 ZNF184Q99676 751 aaPredicted RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 CCDC134Q9H6E4 229 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 TAS2R14Q9NYV8 317 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 NALCNQ8IZF0 1738 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PVALEFA0A1B0GWK0 134 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 FAM47DPA6NHR8 397 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 USP1O94782 785 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 HAUS5O94927 633 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PGM3O95394 542 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 LYNP07948 512 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PTPN4P29074 926 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 BPIFB4P59827 614 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 Q4G0T1 1027 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 SGO2Q562F6 1265 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 C6orf163Q5TEZ5 329 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 KRT25Q7Z3Z0 450 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 APLFQ8IW19 511 aaPredicted RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 RASGEF1CQ8N431 466 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 NRG4Q8WWG1 115 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 RAD54LQ92698 747 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 VPS37BQ9H9H4 285 aa10.88□□□□□ -0.67
CLDN1-201ENST00000295522 CNOT7Q9UIV1 285 aaKnown RBP10.88□□□□□ -0.67
CLDN1-201ENST00000295522 KLRF2D3W0D1 207 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 LAD1O00515 517 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 EXOC3O60645 756 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 ZBED4O75132 1171 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 C4orf50Q6ZRC1 276 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 TRIM59Q8IWR1 403 aa10.87□□□□□ -0.67
CLDN1-201ENST00000295522 KLF6Q99612 283 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms