RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 WRAP73Q9P2S5 460 aaPredicted RBP16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 PCNTO95613 3336 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 PSMD10O75832 226 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 COPB2P35606 906 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 CASP5P51878 434 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 KCNJ2P63252 427 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 UBAP2Q5T6F2 1119 aaKnown RBP16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 DCAF15Q66K64 600 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 ATXN2LQ8WWM7 1075 aaKnown RBP16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 TAAR1Q96RJ0 339 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 ZNF577Q9BSK1 485 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 ABCF3Q9NUQ8 709 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 C15orf41Q9Y2V0 281 aa16.49■□□□□ 0.23
LRRTM1-201ENST00000295057 TLDC2A0PJX2 215 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 SFI1A8K8P3 1242 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 EIF2AK2P19525 551 aaKnown RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 HSD17B4P51659 736 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 ZCWPW2Q504Y3 356 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 ERMNQ8TAM6 284 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 LMBR1Q8WVP7 490 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 EPB41L4BQ9H329 900 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 CNOT10Q9H9A5 744 aaKnown RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 AIPL1Q9NZN9 384 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 ZNF112Q9UJU3 913 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 SSC5DA1L4H1 1573 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 SLITRK3O94933 977 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 RPS6P62753 249 aaKnown RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 FKBP3Q00688 224 aaKnown RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 FAM26FQ5R3K3 315 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 CDCA2Q69YH5 1023 aaPredicted RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 BZW1Q7L1Q6 419 aaKnown RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 PIGWQ7Z7B1 504 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 MYOCDQ8IZQ8 938 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 ANKS4BQ8N8V4 417 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 PRCCQ92733 491 aaPredicted RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 ZNF570Q96NI8 536 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 PRMT1Q99873 361 aaKnown RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 REEP2Q9BRK0 252 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 UNC45AQ9H3U1 944 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 BMP2KQ9NSY1 1161 aaPredicted RBP16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 PCDHA2Q9Y5H9 948 aa16.48■□□□□ 0.23
LRRTM1-201ENST00000295057 ADM5C9JUS6 153 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 VWA5AO00534 786 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 GAS7O60861 476 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 IFI35P80217 286 aaPredicted RBP16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 TRAF1Q13077 416 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 TRMT1LQ7Z2T5 733 aaKnown RBP16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 ADAT2Q7Z6V5 191 aaKnown RBP16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 TPCN2Q8NHX9 752 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 SYTL5Q8TDW5 730 aaPredicted RBP16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 SLC5A5Q92911 643 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 GANQ9H2C0 597 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 RNF181Q9P0P0 153 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 YBX3P16989 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 PEX19P40855 299 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 GIT2Q14161 759 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 PEX26Q7Z412 305 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 IRF2BP2Q7Z5L9 587 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 CENPTQ96BT3 561 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 FMO2Q99518 471 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 HSD17B14Q9BPX1 270 aa16.47■□□□□ 0.23
LRRTM1-201ENST00000295057 A8MUI8 341 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 IFNAR2P48551 515 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 TRPM8Q7Z2W7 1104 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 TRIM59Q8IWR1 403 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 CCDC26Q8TAB7 109 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 SEC14L1Q92503 715 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 SAAL1Q96ER3 474 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 L3MBTL3Q96JM7 780 aaPredicted RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 TXLNGYQ9BZA5 131 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 IKZF4Q9H2S9 585 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 NAGPAQ9UK23 515 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 UTP11Q9Y3A2 253 aaKnown RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 CCDC188H7C350 402 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 IPO5O00410 1097 aaKnown RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 PPFIA2O75334 1257 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 MYCLP12524 364 aaPredicted RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 SSR1P43307 286 aaKnown RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 SYT2Q8N9I0 419 aaPredicted RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 UHMK1Q8TAS1 419 aaKnown RBP16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 MICAL1Q8TDZ2 1067 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 MXRA8Q9BRK3 442 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 LRRC27Q9C0I9 530 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 AZI2Q9H6S1 392 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 KCNH7Q9NS40 1196 aa16.46■□□□□ 0.23
LRRTM1-201ENST00000295057 BTNL10A8MVZ5 291 aa16.45■□□□□ 0.22
LRRTM1-201ENST00000295057 ASAP2O43150 1006 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms