RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 RBAK-RBAKDNI3L0D1 243 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 HNRNPDLO14979 420 aaKnown RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 CLIC2O15247 247 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 CALUO43852 315 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 PIGRP01833 764 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 PTMAP06454 111 aaKnown RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 FGFR4P22455 802 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 ZNF618Q5T7W0 954 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 HS2ST1Q7LGA3 356 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 GOLGA5Q8TBA6 731 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 PRDM5Q9NQX1 630 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 NFE2L3Q9Y4A8 694 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 SYN1P17600 705 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 LIG4P49917 911 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 RBL2Q08999 1139 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 PRPF4BQ13523 1007 aaKnown RBP19.46■□□□□ 0.71
CCDC78-201ENST00000293889 EDRF1Q3B7T1 1238 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 TRAF7Q6Q0C0 670 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 CSGALNACT2Q8N6G5 542 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 CAGE1Q8TC20 777 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 EEF2KMTQ96G04 330 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 ACO2Q99798 780 aaKnown RBP19.46■□□□□ 0.71
CCDC78-201ENST00000293889 TMEM39AQ9NV64 488 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 FANCLQ9NW38 375 aa19.46■□□□□ 0.71
CCDC78-201ENST00000293889 ZMYND8Q9ULU4 1186 aaPredicted RBP19.46■□□□□ 0.71
CCDC78-201ENST00000293889 NR3C1P04150 777 aa19.45■□□□□ 0.7
CCDC78-201ENST00000293889 ITGB8P26012 769 aa19.45■□□□□ 0.7
CCDC78-201ENST00000293889 ADSSP30520 456 aa19.45■□□□□ 0.7
CCDC78-201ENST00000293889 SNRPFP62306 86 aaKnown RBP19.45■□□□□ 0.7
CCDC78-201ENST00000293889 TPD52L1Q16890 204 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-201ENST00000293889 ZPBP2Q6X784 338 aa19.45■□□□□ 0.7
CCDC78-201ENST00000293889 PRIMPOLQ96LW4 560 aa19.45■□□□□ 0.7
CCDC78-201ENST00000293889 SRRTQ9BXP5 876 aaKnown RBP19.45■□□□□ 0.7
CCDC78-201ENST00000293889 HSD3B7Q9H2F3 369 aa19.45■□□□□ 0.7
CCDC78-201ENST00000293889 SAMSN1Q9NSI8 373 aaKnown RBP19.45■□□□□ 0.7
CCDC78-201ENST00000293889 CGNQ9P2M7 1197 aaKnown RBP19.45■□□□□ 0.7
CCDC78-201ENST00000293889 NOC2LQ9Y3T9 749 aaKnown RBP19.45■□□□□ 0.7
CCDC78-201ENST00000293889 TANC1Q9C0D5 1861 aa19.45■□□□□ 0.7
CCDC78-201ENST00000293889 KIAA0355O15063 1070 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 TSPAN1O60635 241 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 ERLIN2O94905 339 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 SFPQP23246 707 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC78-201ENST00000293889 FKBP3Q00688 224 aaKnown RBP19.44■□□□□ 0.7
CCDC78-201ENST00000293889 BFSP2Q13515 415 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 NFIL3Q16649 462 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 LRRC55Q6ZSA7 311 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 CATSPER4Q7RTX7 472 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 ZC3H3Q8IXZ2 948 aaKnown RBP19.44■□□□□ 0.7
CCDC78-201ENST00000293889 CCDC155Q8N6L0 562 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 ZBTB45Q96K62 511 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-201ENST00000293889 CBWD1Q9BRT8 395 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 OSBPL7Q9BZF2 842 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 SPTLC3Q9NUV7 552 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 NR2E3Q9Y5X4 410 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 CNTNAP2Q9UHC6 1331 aa19.44■□□□□ 0.7
CCDC78-201ENST00000293889 GOLGA6L19H0YKK7 550 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 ARF4P18085 180 aaPredicted RBP19.43■□□□□ 0.7
CCDC78-201ENST00000293889 NR2F2P24468 414 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 ADAM9Q13443 819 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 PCBP1Q15365 356 aaKnown RBP eCLIP19.43■□□□□ 0.7
CCDC78-201ENST00000293889 FBXO47Q5MNV8 452 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 ATF7IP2Q5U623 682 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 TSHZ1Q6ZSZ6 1077 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 FAM228AQ86W67 206 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 C12orf56Q8IXR9 622 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 CPB2Q96IY4 423 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 NOC4LQ9BVI4 516 aaKnown RBP19.43■□□□□ 0.7
CCDC78-201ENST00000293889 PCIF1Q9H4Z3 704 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 DMAC2Q9NW81 257 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 STYXL1Q9Y6J8 313 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 SCN5AQ14524 2016 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 UMODL1Q5DID0 1318 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 SELPP16109 830 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 RPL13P26373 211 aaKnown RBP19.43■□□□□ 0.7
CCDC78-201ENST00000293889 CYP2J2P51589 502 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 TMEM132AQ24JP5 1023 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 HSP90AA4PQ58FG1 418 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 IRF2BP1Q8IU81 584 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 SLC9A9Q8IVB4 645 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 PPP1R12CQ9BZL4 782 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 HAPLN2Q9GZV7 340 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 HIPK3Q9H422 1215 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 PTPRHQ9HD43 1115 aa19.43■□□□□ 0.7
CCDC78-201ENST00000293889 H0YGN5 161 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 PITPNM1O00562 1244 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 RPS6KA5O75582 802 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 TOM1L1O75674 476 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 GHRP10912 638 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 HOXA11P31270 313 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-201ENST00000293889 LPIN1Q14693 890 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 MBTPS1Q14703 1052 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 CDKAL1Q5VV42 579 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 EEF1DP3Q658K8 133 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 SLFN12LQ6IEE8 588 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 LRRC8DQ7L1W4 858 aa19.42■□□□□ 0.7
CCDC78-201ENST00000293889 CDR2LQ86X02 465 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-201ENST00000293889 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
CCDC78-201ENST00000293889 TMEM174Q8WUU8 243 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms