RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 RBM19Q9Y4C8 960 aaKnown RBP27.7■■■□□ 2.02
PDF-201ENST00000288022 PHLPP2Q6ZVD8 1323 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 SLC16A4O15374 487 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 BRD1O95696 1058 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 SMTNP53814 917 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 RNASELQ05823 741 aaKnown RBP27.69■■■□□ 2.02
PDF-201ENST00000288022 CSPP1Q1MSJ5 1256 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 KCNG4Q8TDN1 519 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 ZNF558Q96NG5 402 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 ADPGKQ9BRR6 497 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 NXF3Q9H4D5 531 aaKnown RBP27.69■■■□□ 2.02
PDF-201ENST00000288022 PDZD7Q9H5P4 517 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 UBN1Q9NPG3 1134 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 ODF2LQ9ULJ1 636 aa27.69■■■□□ 2.02
PDF-201ENST00000288022 MYH11P35749 1972 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 CUTAO60888 179 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 FAM13AO94988 1023 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 EDN1P05305 212 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 STAT6P42226 847 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 KCNT2Q6UVM3 1135 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 CCDC73Q6ZRK6 1079 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 GBP3Q9H0R5 595 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 RNF39Q9H2S5 420 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 ZHX3Q9H4I2 956 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 TBC1D13Q9NVG8 400 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 LARSQ9P2J5 1176 aaKnown RBP27.68■■■□□ 2.02
PDF-201ENST00000288022 ARHGAP28Q9P2N2 729 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 ZDHHC9Q9Y397 364 aa27.68■■■□□ 2.02
PDF-201ENST00000288022 TBCAO75347 108 aaKnown RBP27.67■■■□□ 2.02
PDF-201ENST00000288022 FGF18O76093 207 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 PBX3P40426 434 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 ME1P48163 572 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 TIGD5Q53EQ6 642 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 PDILTQ8N807 584 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 SPPL3Q8TCT6 385 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 SPIRE2Q8WWL2 714 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 TMEM134Q9H6X4 195 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 PRDM6Q9NQX0 595 aa27.67■■■□□ 2.02
PDF-201ENST00000288022 PRRC2BQ5JSZ5 2229 aaKnown RBP27.67■■■□□ 2.02
PDF-201ENST00000288022 COL6A3P12111 3177 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 ZC3H11AO75152 810 aaKnown RBP eCLIP27.66■■■□□ 2.02
PDF-201ENST00000288022 GIT2Q14161 759 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 NT5DC1Q5TFE4 455 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 ATF7IP2Q5U623 682 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.66■■■□□ 2.02
PDF-201ENST00000288022 POF1BQ8WVV4 589 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 NTPCRQ9BSD7 190 aaKnown RBP27.66■■■□□ 2.02
PDF-201ENST00000288022 KANSL3Q9P2N6 904 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 PARP2Q9UGN5 583 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 TRANK1O15050 2925 aa27.66■■■□□ 2.02
PDF-201ENST00000288022 AKAP5P24588 427 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 PPM1AP35813 382 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 MLH1P40692 756 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 ALDH7A1P49419 539 aaKnown RBP27.65■■■□□ 2.02
PDF-201ENST00000288022 BCAR1P56945 870 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 STRN3Q13033 797 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 EEF1DP3Q658K8 133 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 SV2BQ7L1I2 683 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 MYCT1Q8N699 235 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 FAM193BQ96PV7 902 aaPredicted RBP27.65■■■□□ 2.02
PDF-201ENST00000288022 GAD1Q99259 594 aa27.65■■■□□ 2.02
PDF-201ENST00000288022 MRPL4Q9BYD3 311 aaKnown RBP27.65■■■□□ 2.02
PDF-201ENST00000288022 PLXNA4Q9HCM2 1894 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 A0A087X0B3 334 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 POMCP01189 267 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 AFF1P51825 1210 aaKnown RBP27.64■■■□□ 2.02
PDF-201ENST00000288022 APBB1IPQ7Z5R6 666 aaPredicted RBP27.64■■■□□ 2.02
PDF-201ENST00000288022 TMEM161BQ8NDZ6 487 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 NSUN3Q9H649 340 aaKnown RBP27.64■■■□□ 2.02
PDF-201ENST00000288022 NRDE2Q9H7Z3 1164 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 PARVGQ9HBI0 331 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 SPG21Q9NZD8 308 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 GIT1Q9Y2X7 761 aa27.64■■■□□ 2.02
PDF-201ENST00000288022 ARL5CA6NH57 179 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 H0YCG3 227 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 DNAJB1P25685 340 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 DCAF4L1Q3SXM0 396 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 DYMQ7RTS9 669 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 TAS1R3Q7RTX0 852 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 TARS2Q9BW92 718 aaKnown RBP27.63■■■□□ 2.01
PDF-201ENST00000288022 KLK14Q9P0G3 267 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 PCDHA7Q9UN72 937 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 TNFSF13BQ9Y275 285 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 ATP6V1DQ9Y5K8 247 aa27.63■■■□□ 2.01
PDF-201ENST00000288022 NT5C1B-RDH14C9J2C7 533 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 MAPTP10636 758 aaKnown RBP27.62■■■□□ 2.01
PDF-201ENST00000288022 KRT85P78386 507 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 KRT17Q04695 432 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 UBE3AQ05086 875 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 TCEAL5Q5H9L2 206 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 SHC4Q6S5L8 630 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 ZNF280BQ86YH2 543 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 MICAL1Q8TDZ2 1067 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 ZFP42Q96MM3 310 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 ACO2Q99798 780 aaKnown RBP27.62■■■□□ 2.01
PDF-201ENST00000288022 THEGQ9P2T0 379 aa27.62■■■□□ 2.01
PDF-201ENST00000288022 PUF60Q9UHX1 559 aaKnown RBP27.62■■■□□ 2.01
PDF-201ENST00000288022 K7ENM7 598 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 SCNN1GP51170 649 aa27.61■■■□□ 2.01
PDF-201ENST00000288022 ZNF131P52739 623 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms