RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 BICD1Q96G01 975 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 RBSNQ9H1K0 784 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 HSD3B7Q9H2F3 369 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 ST3GAL5Q9UNP4 418 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 CNTNAP2Q9UHC6 1331 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 A0A1B0GUA9 196 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 NBNO60934 754 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 ERLIN2O94905 339 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 CAVIN2O95810 425 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 PROZP22891 400 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 SFPQP23246 707 aaKnown RBP eCLIP23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 CD52P31358 61 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 LIG4P49917 911 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 ATF7IP2Q5U623 682 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 EEF1DP3Q658K8 133 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 CCDC155Q8N6L0 562 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 SCLYQ96I15 445 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 PADI3Q9ULW8 664 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 SCN5AQ14524 2016 aa23.88■■□□□ 1.41
PDLIM3-203ENST00000284771 BICDL2A1A5D9 508 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 CCL23P55773 120 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 PCBP1Q15365 356 aaKnown RBP eCLIP23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 EDRF1Q3B7T1 1238 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 FOXR2Q6PJQ5 311 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 LRRC55Q6ZSA7 311 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 PCIF1Q9H4Z3 704 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 AGPAT5Q9NUQ2 364 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 DMAC2Q9NW81 257 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 TNFSF13BQ9Y275 285 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 SQORQ9Y6N5 450 aa23.87■■□□□ 1.41
PDLIM3-203ENST00000284771 TOM1L1O75674 476 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 MYL5Q02045 173 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 NFX1Q12986 1120 aaKnown RBP23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 SPATA1Q5VX52 437 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 HS2ST1Q7LGA3 356 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 PDZD7Q9H5P4 517 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 ERVK-5Q9HDB9 667 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 SAMSN1Q9NSI8 373 aaKnown RBP23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 NFE2L3Q9Y4A8 694 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 IKBKBO14920 756 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 NR3C1P04150 777 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 ADAM9Q13443 819 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 IRF2BP1Q8IU81 584 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 C12orf56Q8IXR9 622 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 ZC3H3Q8IXZ2 948 aaKnown RBP23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 CSGALNACT2Q8N6G5 542 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 TMEM174Q8WUU8 243 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 VWCEQ96DN2 955 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 SRRTQ9BXP5 876 aaKnown RBP23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 TMX1Q9H3N1 280 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 FANCLQ9NW38 375 aa23.86■■□□□ 1.41
PDLIM3-203ENST00000284771 A0A0B4J269 797 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 KIAA0355O15063 1070 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 CALUO43852 315 aaPredicted RBP23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 NR2F2P24468 414 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 SNRPFP62306 86 aaKnown RBP23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 NFIL3Q16649 462 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 USP38Q8NB14 1042 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 TSG101Q99816 390 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 PRDM5Q9NQX1 630 aaPredicted RBP23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 ANKFY1Q9P2R3 1169 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 TANC1Q9C0D5 1861 aa23.85■■□□□ 1.41
PDLIM3-203ENST00000284771 GPR182O15218 404 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 CLDN3O15551 220 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 CASP4P49662 377 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 FKBP3Q00688 224 aaKnown RBP23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 HSP90AA4PQ58FG1 418 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 ARMCX5Q6P1M9 558 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 ZBTB33Q86T24 672 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 SLC9A9Q8IVB4 645 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 GOLGA5Q8TBA6 731 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 POMGNT1Q8WZA1 660 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 HSPBP1Q9NZL4 362 aa23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 CGNQ9P2M7 1197 aaKnown RBP23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 PIN4Q9Y237 131 aaKnown RBP23.84■■□□□ 1.41
PDLIM3-203ENST00000284771 FAM189A1O60320 539 aa23.83■■□□□ 1.41
PDLIM3-203ENST00000284771 TIMP1P01033 207 aa23.83■■□□□ 1.41
PDLIM3-203ENST00000284771 GARTP22102 1010 aa23.83■■□□□ 1.41
PDLIM3-203ENST00000284771 MCL1Q07820 350 aa23.83■■□□□ 1.41
PDLIM3-203ENST00000284771 PAK2Q13177 524 aa23.83■■□□□ 1.41
PDLIM3-203ENST00000284771 MPZL3Q6UWV2 235 aa23.83■■□□□ 1.41
PDLIM3-203ENST00000284771 TCHPQ9BT92 498 aa23.83■■□□□ 1.41
PDLIM3-203ENST00000284771 MGEA5O60502 916 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 AKAP3O75969 853 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 AXLP30530 894 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 CYP2J2P51589 502 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 ZBTB41Q5SVQ8 909 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 UBXN11Q5T124 520 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 SLFN12LQ6IEE8 588 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 SAAL1Q96ER3 474 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 EIF2AQ9BY44 585 aaKnown RBP23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 IFIH1Q9BYX4 1025 aaKnown RBP23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 CDT1Q9H211 546 aa23.83■■□□□ 1.4
PDLIM3-203ENST00000284771 TMEM132AQ24JP5 1023 aa23.82■■□□□ 1.4
PDLIM3-203ENST00000284771 TCTN1Q2MV58 587 aa23.82■■□□□ 1.4
PDLIM3-203ENST00000284771 SEZ6Q53EL9 994 aa23.82■■□□□ 1.4
PDLIM3-203ENST00000284771 PLEKHG4Q58EX7 1191 aa23.82■■□□□ 1.4
PDLIM3-203ENST00000284771 NOTUMQ6P988 496 aa23.82■■□□□ 1.4
PDLIM3-203ENST00000284771 CEP120Q8N960 986 aa23.82■■□□□ 1.4
PDLIM3-203ENST00000284771 GOLGA8IPA6NC78 632 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms