RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 LRRC43Q8N309 656 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ARL8AQ96BM9 186 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PRPF18Q99633 342 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 POLE3Q9NRF9 147 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 STOML1Q9UBI4 398 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 IP6K2Q9UHH9 426 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PCDHA10Q9Y5I2 948 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CFAP65Q6ZU64 1925 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGEF5Q12774 1597 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 TARSL2A2RTX5 802 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 C3orf70A6NLC5 250 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SLC16A3O15427 465 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 APOA1P02647 267 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 RPS12P25398 132 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 TJAP1Q5JTD0 557 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 TRIM69Q86WT6 500 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PGBD3Q8N328 593 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SYT2Q8N9I0 419 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 RIN2Q8WYP3 895 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 RUBCNQ92622 972 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF512Q96ME7 567 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ZFYVE28Q9HCC9 887 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 KRCC1Q9NPI7 259 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PRDM5Q9NQX1 630 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ZSCAN32Q9NX65 697 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 MYO5CQ9NQX4 1742 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 CFLARO15519 480 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PLS3P13797 630 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 AKT1P31749 480 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ACTR2P61160 394 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ELAVL2Q12926 359 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 MTA1Q13330 715 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PDCLQ13371 301 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 AP1ARQ63HQ0 302 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 LCA5Q86VQ0 697 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 PPHLN1Q8NEY8 458 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ZMAT2Q96NC0 199 aaKnown RBP4.31□□□□□ -1.72
SCN3A-201ENST00000283254 SPON2Q9BUD6 331 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 MTMR6Q9Y217 621 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 ABCA8O94911 1581 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 USP6P35125 1406 aa4.31□□□□□ -1.72
SCN3A-201ENST00000283254 P4HBP07237 508 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 NR1D1P20393 614 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ADD2P35612 726 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RFC5P40937 340 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PNPLA4P41247 253 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 AARSP49588 968 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ROR1Q01973 937 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 DUOXA2Q1HG44 320 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RARS2Q5T160 578 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF544Q6NX49 715 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 BBS7Q8IWZ6 715 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 KRT78Q8N1N4 520 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 MED15Q96RN5 788 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 OSBPL3Q9H4L5 887 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 EVA1BQ9NVM1 165 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 GTSE1Q9NYZ3 720 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 VPS51Q9UID3 782 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 NDUFB9Q9Y6M9 179 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RNF103-CHMP3A0A140T963 221 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CAND2O75155 1236 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 TOMM70O94826 608 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CETPP11597 493 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 NCF2P19878 526 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 C4BPBP20851 252 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 NEK2P51955 445 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PSMC1P62191 440 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 KRT17Q04695 432 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 DPYDQ12882 1025 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ADAT2Q7Z6V5 191 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 TRIML2Q8N7C3 387 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF579Q8NAF0 562 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 GFM2Q969S9 779 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CYTH2Q99418 400 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PKD2L2Q9NZM6 624 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 TPX2Q9ULW0 747 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PRPF4O43172 522 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PSMD3O43242 534 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 IL18RAPO95256 599 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CD4P01730 458 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RBP5P82980 135 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 INPP5AQ14642 412 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 AASDHQ4L235 1098 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 NBPF10Q6P3W6 841 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RHOT1Q8IXI2 618 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CARD14Q9BXL6 1004 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ANAPC7Q9UJX3 599 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PTPRZ1P23471 2315 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 A0A087WUV0 522 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 GRID2IPA4D2P6 1211 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PRRG1O14668 218 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ZSCAN9O15535 394 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CLASP2O75122 1294 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SASH1O94885 1247 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SLC25A27O95847 323 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RARBP10826 455 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 GUCA1AP43080 201 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 USP11P51784 963 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PMS2P54278 862 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 TGM3Q08188 693 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms