RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RSPH10B2B2RC85 870 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 RSPH10BP0C881 870 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 KCNQ4P56696 695 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 DDX17Q92841 729 aaKnown RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 PCIF1Q9H4Z3 704 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 KIAA1586Q9HCI6 787 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 PYCARDQ9ULZ3 195 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 NFIBO00712 420 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 PLA2G4BP0C869 781 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 GNAT1P11488 350 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 SHROOM1Q2M3G4 852 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 RTL3Q8N8U3 475 aaKnown RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ATP6V1G3Q96LB4 118 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 C17orf80Q9BSJ5 609 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 NDST4Q9H3R1 872 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 MAN1B1Q9UKM7 699 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 USP19O94966 1318 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 SUPT3HB4E1H0 165 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 APOL1O14791 398 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 CSPG5O95196 566 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 KCNA3P22001 575 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 GGCXP38435 758 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ALDH18A1P54886 795 aaKnown RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ALKBH5Q6P6C2 394 aaKnown RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 CATSPER4Q7RTX7 472 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 CLEC4FQ8N1N0 589 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ZBTB38Q8NAP3 1195 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 PCYOX1LQ8NBM8 494 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ASAP3Q8TDY4 903 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 MXD3Q9BW11 206 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 BTG4Q9NY30 223 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 SCN3BQ9NY72 215 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 DENND3A2RUS2 1198 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 AKAP10O43572 662 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 TRIM72Q6ZMU5 477 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 SMYD4Q8IYR2 804 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 OR6B3Q8NGW1 331 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 RBBP8Q99708 897 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 RNF103O00237 685 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ZBTB7BO15156 539 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 HUS1O60921 280 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 PPCSQ9HAB8 311 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 FANCEQ9HB96 536 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ADAM30Q9UKF2 790 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 XDHP47989 1333 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 FBLN1P23142 703 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ZBED8Q8IZ13 594 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 TRIM63Q969Q1 353 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 RMDN1Q96DB5 314 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 COQ7Q99807 217 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 CCT7Q99832 543 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 NRBP1Q9UHY1 535 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 GRK2P25098 689 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 TAP1Q03518 808 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 SPICE1Q8N0Z3 855 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 GPT2Q8TD30 523 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 COL17A1Q9UMD9 1497 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-201ENST00000282516 MYOM2P54296 1465 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 STK25O00506 426 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 BRAFP15056 766 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 KRT31Q15323 416 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 FBXO38Q6PIJ6 1188 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 KLHL24Q6TFL4 600 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 SDR42E1Q8WUS8 393 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 CDYLQ9Y232 598 aa9.22□□□□□ -0.93
NIPBL-201ENST00000282516 P3H1Q32P28 736 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 SUPT20HL1Q3ZLR7 823 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 WLSQ5T9L3 541 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 OLFML2BQ68BL8 750 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 TMC4Q7Z404 712 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 SH3GLB2Q9NR46 395 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 IREB2P48200 963 aaKnown RBP9.21□□□□□ -0.93
NIPBL-201ENST00000282516 CENPAP49450 140 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 OSTNP61366 133 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 DCAF4L1Q3SXM0 396 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 SPDYAQ5MJ70 313 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 APLFQ8IW19 511 aaPredicted RBP9.21□□□□□ -0.93
NIPBL-201ENST00000282516 WNT8AQ9H1J5 351 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 KLC4Q9NSK0 619 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 TYK2P29597 1187 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 UGP2Q16851 508 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 PDXDC2PQ6P474 469 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 AGGF1Q8N302 714 aaeCLIP9.21□□□□□ -0.931e-6■□□□□ 8.6
NIPBL-201ENST00000282516 EPS8L2Q9H6S3 715 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 EXOSC4Q9NPD3 245 aaKnown RBP9.21□□□□□ -0.93
NIPBL-201ENST00000282516 IMPAD1Q9NX62 359 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 CLASP2O75122 1294 aaKnown RBP9.21□□□□□ -0.93
NIPBL-201ENST00000282516 SRP72O76094 671 aaKnown RBP9.21□□□□□ -0.93
NIPBL-201ENST00000282516 CCNE1P24864 410 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 KLC1Q07866 573 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 SCRN1Q12765 414 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 ANO4Q32M45 955 aa9.21□□□□□ -0.93
NIPBL-201ENST00000282516 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.93
NIPBL-201ENST00000282516 FBXL5Q9UKA1 691 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms