RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PDGFCQ9NRA1 345 aa19.44■□□□□ 0.7
CAPN1-201ENST00000279247 GALCP54803 685 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 ARMC9Q7Z3E5 817 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 PNMA8AQ86V59 439 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-201ENST00000279247 KRT222Q8N1A0 295 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 DHX38Q92620 1227 aaKnown RBP19.43■□□□□ 0.7
CAPN1-201ENST00000279247 PPP1R16BQ96T49 567 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 TARS2Q9BW92 718 aaKnown RBP19.43■□□□□ 0.7
CAPN1-201ENST00000279247 IGSF9BQ9UPX0 1349 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 STRN3Q13033 797 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 PARD3BQ8TEW8 1205 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 HDAC7Q8WUI4 952 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 DNAH12Q6ZR08 3092 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 K7ERI5 159 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 CXCL11O14625 94 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 ZRANB2O95218 330 aaKnown RBP eCLIP19.43■□□□□ 0.74e-7■■■■■ 32.1
CAPN1-201ENST00000279247 TBC1D8O95759 1140 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 GJB1P08034 283 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 SRGAP2CP0DJJ0 459 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 GLRA2P23416 452 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 PRKCIP41743 596 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 ZBTB41Q5SVQ8 909 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 RNF10Q8N5U6 811 aaKnown RBP19.43■□□□□ 0.7
CAPN1-201ENST00000279247 AZI2Q9H6S1 392 aa19.43■□□□□ 0.7
CAPN1-201ENST00000279247 MAFBQ9Y5Q3 323 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-201ENST00000279247 POLR3GO15318 223 aaPredicted RBP19.42■□□□□ 0.7
CAPN1-201ENST00000279247 CYP26A1O43174 497 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 CELF2O95319 508 aaKnown RBP19.42■□□□□ 0.7
CAPN1-201ENST00000279247 TNNI1P19237 187 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 FAM212AQ96EL1 285 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 ST6GALNAC4Q9H4F1 302 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 FBXL5Q9UKA1 691 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 KCNK3O14649 394 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 PAFAH1B1P43034 410 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 PDLIM7Q9NR12 457 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
CAPN1-201ENST00000279247 CCDC151A5D8V7 595 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 TCP1P17987 556 aaKnown RBP19.41■□□□□ 0.7
CAPN1-201ENST00000279247 IGBP1P78318 339 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 EPC2Q52LR7 807 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 DAAM2Q86T65 1068 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 CDR2LQ86X02 465 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-201ENST00000279247 SPATA4Q8NEY3 305 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 SPIRE2Q8WWL2 714 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 TCHPQ9BT92 498 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 SGPL1O95470 568 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 OSBPP22059 807 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 TNNT3P45378 269 aaPredicted RBP19.41■□□□□ 0.7
CAPN1-201ENST00000279247 WNT7BP56706 349 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 NLRP11P59045 1033 aaKnown RBP19.41■□□□□ 0.7
CAPN1-201ENST00000279247 PPIL2Q13356 520 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 MYBPC2Q14324 1141 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 NEDD9Q14511 834 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 ZBTB33Q86T24 672 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 GPD1LQ8N335 351 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 TATDN2Q93075 761 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 LRRC1Q9BTT6 524 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 PDE11AQ9HCR9 933 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 TTLL13PA6NNM8 815 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 ICAM3P32942 547 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 BIRC3Q13489 604 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 KRT39Q6A163 491 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 SV2AQ7L0J3 742 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 C12orf56Q8IXR9 622 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 MSANTD4Q8NCY6 345 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 SEPT1Q8WYJ6 367 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 SPATA33Q96N06 139 aa19.41■□□□□ 0.7
CAPN1-201ENST00000279247 RBM12Q9NTZ6 932 aaKnown RBP19.41■□□□□ 0.7
CAPN1-201ENST00000279247 PAPPA2Q9BXP8 1791 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 TMEM110-MUSTN1A8MSY1 372 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 ATMINO43313 823 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-201ENST00000279247 KRT5P13647 590 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 CYP24A1Q07973 514 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 DHX37Q8IY37 1157 aaKnown RBP19.4■□□□□ 0.7
CAPN1-201ENST00000279247 RPUSD2Q8IZ73 545 aaKnown RBP19.4■□□□□ 0.7
CAPN1-201ENST00000279247 KREMEN1Q96MU8 473 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 FNBP1Q96RU3 617 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 NTPCRQ9BSD7 190 aaKnown RBP19.4■□□□□ 0.7
CAPN1-201ENST00000279247 THAP2Q9H0W7 228 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 ARHGAP28Q9P2N2 729 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 EDN1P05305 212 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 SLC47A2Q86VL8 602 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 TAF4BQ92750 862 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 ARHGEF26Q96DR7 871 aa19.4■□□□□ 0.7
CAPN1-201ENST00000279247 N4BP1O75113 896 aaKnown RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 TXNP10599 105 aaKnown RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 SSTR3P32745 418 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 PLA2G4AP47712 749 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 BRD3Q15059 726 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 METTL13Q8N6R0 699 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 SLC17A8Q8NDX2 589 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 FGD4Q96M96 766 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 ZCCHC17Q9NP64 241 aaKnown RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 NRBP2Q9NSY0 501 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 TRPC6Q9Y210 931 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 ZNF233A6NK53 670 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 CSDE1O75534 798 aaKnown RBP19.39■□□□□ 0.69
CAPN1-201ENST00000279247 ERVK-9P63128 1117 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 MOGSQ13724 837 aa19.39■□□□□ 0.69
CAPN1-201ENST00000279247 RPS6KA1Q15418 735 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms