RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TRIM56Q9BRZ2 755 aaKnown RBP12.02□□□□□ -0.49
USP6NL-201ENST00000277575 HDAC6Q9UBN7 1215 aa12.02□□□□□ -0.49
USP6NL-201ENST00000277575 PXDNQ92626 1479 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 S100BP04271 92 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 LIG3P49916 1009 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 EMC2Q15006 297 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 LRRC31Q6UY01 552 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 RAET1EQ8TD07 263 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 RAB3IPQ96QF0 476 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 TAAR1Q96RJ0 339 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 TACO1Q9BSH4 297 aaKnown RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 CNOT10Q9H9A5 744 aaKnown RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 APEX2Q9UBZ4 518 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 TTC7AQ9ULT0 858 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 AGAP1Q9UPQ3 857 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 PITPNM2Q9BZ72 1349 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 UCHL3P15374 230 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 PMLP29590 882 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 FXR1P51114 621 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 KPNA2P52292 529 aaKnown RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 BCAR1P56945 870 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 CCDC38Q502W7 563 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 CLTAP09496 248 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 PNMA6AP0CW24 399 aaPredicted RBP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 RARBP10826 455 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 CDC42EP1Q00587 391 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 ADCY2Q08462 1091 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 MMEL1Q495T6 779 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 PHLDB3Q6NSJ2 640 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 VPS39Q96JC1 886 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 TNIP3Q96KP6 325 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 STK33Q9BYT3 514 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 KRT37O76014 449 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 MYBL1P10243 752 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 SCP2P22307 547 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 CXCL9Q07325 125 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 CATSPER3Q86XQ3 398 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 TRIM59Q8IWR1 403 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 KCTD17Q8N5Z5 321 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 DAGLBQ8NCG7 672 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP6NL-201ENST00000277575 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.495e-7■■□□□ 13.2
USP6NL-201ENST00000277575 UBN1Q9NPG3 1134 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 AGPAT5Q9NUQ2 364 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 SLC8A2Q9UPR5 921 aa12.01□□□□□ -0.49
USP6NL-201ENST00000277575 CREB3O43889 395 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 SLC18A3Q16572 532 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ELMSAN1Q6PJG2 1045 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ENGASEQ8NFI3 743 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 GDAP1Q8TB36 358 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 MORC4Q8TE76 937 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 MROH1Q8NDA8 1641 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 IQANK1A0A1B0GTG1 560 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ESYT3A0FGR9 886 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ICAM1P05362 532 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 NCOA4Q13772 614 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 RCN2Q14257 317 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 SEC23AQ15436 765 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ADGRA1Q86SQ6 560 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 GTF3C2Q8WUA4 911 aaPredicted RBP12□□□□□ -0.49
USP6NL-201ENST00000277575 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
USP6NL-201ENST00000277575 WNT8AQ9H1J5 351 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 SALL3Q9BXA9 1300 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 BCL9O00512 1426 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ITSN1Q15811 1721 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 SSU72P8A0A1W2PR75 194 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 WDR91A4D1P6 747 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
USP6NL-201ENST00000277575 CETPP11597 493 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 JADE1Q6IE81 842 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ANKEF1Q9NU02 776 aa12□□□□□ -0.49
USP6NL-201ENST00000277575 ZBBXA8MT70 800 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 HMGB1P1B2RPK0 211 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-201ENST00000277575 MSH4O15457 936 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 TOM1L1O75674 476 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 CTSHP09668 335 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 CHRNA3P32297 505 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 SSTR3P32745 418 aaPredicted RBP11.99□□□□□ -0.49
USP6NL-201ENST00000277575 RFC5P40937 340 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 RBP5P82980 135 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 NR1I3Q14994 352 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 SH2D4BQ5SQS7 431 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 DEPDC1BQ8WUY9 529 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
USP6NL-201ENST00000277575 CACYBPQ9HB71 228 aaKnown RBP11.99□□□□□ -0.49
USP6NL-201ENST00000277575 MAP2P11137 1827 aaKnown RBP11.99□□□□□ -0.49
USP6NL-201ENST00000277575 ASAP2O43150 1006 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 SLC37A4O43826 429 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 BAG2O95816 211 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 PTPAQ15257 358 aa11.99□□□□□ -0.49
USP6NL-201ENST00000277575 MTFR1LQ9H019 292 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms