RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 COX16Q9P0S2 106 aa12.21□□□□□ -0.45
SKP2-202ENST00000274255 RBAK-RBAKDNI3L0D1 243 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 TRAPPC3O43617 180 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.46
SKP2-202ENST00000274255 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.46
SKP2-202ENST00000274255 VAMP7P51809 220 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 ITGA8P53708 1063 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 BYSLQ13895 437 aaKnown RBP12.21□□□□□ -0.46
SKP2-202ENST00000274255 CDO1Q16878 200 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 SMTNL2Q2TAL5 461 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 FIGNQ5HY92 759 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 TMEM270Q6UE05 265 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 CBWD2Q8IUF1 395 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 AGR3Q8TD06 166 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 SPOCK2Q92563 424 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 NT5C1BQ96P26 610 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 CALN1Q9BXU9 219 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 RTFDC1Q9BY42 306 aaPredicted RBP12.21□□□□□ -0.46
SKP2-202ENST00000274255 ZCWPW1Q9H0M4 648 aa12.21□□□□□ -0.46
SKP2-202ENST00000274255 NOP53Q9NZM5 478 aaKnown RBP12.21□□□□□ -0.46
SKP2-202ENST00000274255 KAT6AQ92794 2004 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 ZSCAN5DPP0CG00 497 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 GCFC2P16383 781 aaKnown RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 ORC1Q13415 861 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 ZC3H18Q86VM9 953 aaKnown RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 CCDC89Q8N998 374 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 LNX1Q8TBB1 728 aaPredicted RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 TBC1D22AQ8WUA7 517 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 TTC1Q99614 292 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 MAD1L1Q9Y6D9 718 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 ARP10275 920 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 ADCY2Q08462 1091 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 GPS1Q13098 491 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 MTERF2Q49AM1 385 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 ARSHQ5FYA8 562 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 CDC42EP5Q6NZY7 148 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 SPATA21Q7Z572 469 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 IRF2BP2Q7Z5L9 587 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 ARHGEF19Q8IW93 802 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 CEP170P1Q96L14 293 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 SMC6Q96SB8 1091 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 PABPC3Q9H361 631 aaKnown RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 CDC42EP4Q9H3Q1 356 aaKnown RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 APEX2Q9UBZ4 518 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 DDTLA6NHG4 134 aaPredicted RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 BANF1O75531 89 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 RPS6KA5O75582 802 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 PRLRP16471 622 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 IL9RQ01113 521 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 MAPK7Q13164 816 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 SPOPLQ6IQ16 392 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 TEKT3Q9BXF9 490 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 SLITRK6Q9H5Y7 841 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 SAE1Q9UBE0 346 aaPredicted RBP12.2□□□□□ -0.46
SKP2-202ENST00000274255 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 CACNA1FO60840 1977 aa12.2□□□□□ -0.46
SKP2-202ENST00000274255 ANKRD63C9JTQ0 380 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 IPO5O00410 1097 aaKnown RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 GBP1P32455 592 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 CRKP46108 304 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 ALDH5A1P51649 535 aaPredicted RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 SKOR1P84550 965 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 ATP13A4Q4VNC1 1196 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 RASIP1Q5U651 963 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 IZUMO3Q5VZ72 239 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 CCDC124Q96CT7 223 aaKnown RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 IMPG2Q9BZV3 1241 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 SLC13A1Q9BZW2 595 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 CHST7Q9NS84 486 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 C1orf112Q9NSG2 853 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 CPSF2Q9P2I0 782 aaKnown RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 CBX6O95503 412 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 EIF3BP55884 814 aaKnown RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 EML3Q32P44 896 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 FRMD5Q7Z6J6 570 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 LMNTD2Q8IXW0 634 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 PPP1R36Q96LQ0 422 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 MKNK1Q9BUB5 465 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 USP15Q9Y4E8 981 aaPredicted RBP12.19□□□□□ -0.46
SKP2-202ENST00000274255 PDXKO00764 312 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 KRT1P04264 644 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 PRAMEF18Q5VWM3 479 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 CNPY4Q8N129 248 aa12.19□□□□□ -0.46
SKP2-202ENST00000274255 NACC1Q96RE7 527 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms