RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CBX5P45973 191 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 ALDH18A1P54886 795 aaKnown RBP9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 RAB14P61106 215 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 RALYLQ86SE5 291 aaKnown RBP9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 COL26A1Q96A83 441 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 CEP19Q96LK0 163 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 SHCBP1LQ9BZQ2 653 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 SNRKQ9NRH2 765 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 PAG1Q9NWQ8 432 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 DUSP12Q9UNI6 340 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 MED16Q9Y2X0 877 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 PCDHGA1Q9Y5H4 931 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 CYP27B1O15528 508 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 COL6A1P12109 1028 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 GSTT1P30711 240 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 SCNN1AP37088 669 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 SQLEQ14534 574 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 PATL1Q86TB9 770 aaKnown RBP9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 IFNL2Q8IZJ0 200 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 ZNF366Q8N895 744 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 METTL6Q8TCB7 284 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 RRP36Q96EU6 259 aaKnown RBP9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 ZNF845Q96IR2 970 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 CGREF1Q99674 301 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 MLPHQ9BV36 600 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 CUEDC1Q9NWM3 386 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 MCM9Q9NXL9 1143 aa9.46□□□□□ -0.9
CTDSPL-201ENST00000273179 SCAMP3O14828 347 aaKnown RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 HDAC3O15379 428 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 GZMAP12544 262 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 RAC2P15153 192 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 STAT6P42226 847 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 KRT17Q04695 432 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 CUL2Q13617 745 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 PDCD4Q53EL6 469 aaKnown RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ARHGAP11AQ6P4F7 1023 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 CNSTQ6PJW8 725 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 BEND4Q6ZU67 534 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 CCNYL1Q8N7R7 359 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 PHF21AQ96BD5 680 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 STAMBPL1Q96FJ0 436 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 VPS39Q96JC1 886 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 APBA2Q99767 749 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 SP140LQ9H930 580 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 HPF1Q9NWY4 346 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 CTTNBP2NLQ9P2B4 639 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 PDP2Q9P2J9 529 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 MYO3AQ8NEV4 1616 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ZC3H13Q5T200 1668 aaKnown RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 K7ENM7 598 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 MAP3K13O43283 966 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 NCK2O43639 380 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 DLATP10515 647 aaKnown RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 SSTP61278 116 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 PHEXP78562 749 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 OCA2Q04671 838 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 PLA2G4EQ3MJ16 856 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ARMC6Q6NXE6 501 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 USP37Q86T82 979 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 STK32AQ8WU08 396 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 NOD2Q9HC29 1040 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 IL20Q9NYY1 176 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 WDR35Q9P2L0 1181 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 PACSIN2Q9UNF0 486 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 CYP2C9P11712 490 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 TRIM27P14373 513 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ATXN3P54252 364 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 C21orf58P58505 322 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 STX3Q13277 289 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 TCIRG1Q13488 830 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 RASGRF1Q13972 1273 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 COG2Q14746 738 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 INSCQ1MX18 579 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 FBXO30Q8TB52 745 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 FRMD6Q96NE9 622 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 TMEM245Q9H330 911 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ORC3Q9UBD5 711 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 TTC21BQ7Z4L5 1316 aa9.45□□□□□ -0.9
CTDSPL-201ENST00000273179 ZBBXA8MT70 800 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 EFCAB8A8MWE9 144 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 A8MX80 341 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 DNALI1O14645 258 aaPredicted RBP9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 IKBKBO14920 756 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 ANGPT2O15123 496 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 CRTAPO75718 401 aaPredicted RBP9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 MT-ND3P03897 115 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 ME1P48163 572 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 GNAQP50148 359 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 RAP1GDS1P52306 607 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 C16orf86Q6ZW13 317 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 METTL3Q86U44 580 aaKnown RBP9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 CCDC13Q8IYE1 715 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 EXT2Q93063 718 aa9.44□□□□□ -0.9
CTDSPL-201ENST00000273179 TRAPPC9Q96Q05 1148 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms