RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 NIFKQ9BYG3 293 aaKnown RBP26.99■■□□□ 1.91
SSBP4-201ENST00000270061 VTNP04004 478 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 GAP43P17677 238 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 HTRA4P83105 476 aaPredicted RBP26.99■■□□□ 1.91
SSBP4-201ENST00000270061 KRT31Q15323 416 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 TARBP2Q15633 366 aaKnown RBP26.99■■□□□ 1.91
SSBP4-201ENST00000270061 LRRC71Q8N4P6 559 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 RTN4Q9NQC3 1192 aaKnown RBP26.99■■□□□ 1.91
SSBP4-201ENST00000270061 AKT3Q9Y243 479 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 COL4A3BPQ9Y5P4 624 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 PRRC2BQ5JSZ5 2229 aaKnown RBP26.99■■□□□ 1.91
SSBP4-201ENST00000270061 REV3LO60673 3130 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 ZBTB39O15060 712 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 DKC1O60832 514 aaKnown RBP eCLIP26.98■■□□□ 1.91
SSBP4-201ENST00000270061 ADGRE1Q14246 886 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 KIZQ2M2Z5 673 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 MTERF2Q49AM1 385 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 SLC17A8Q8NDX2 589 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 ARNTL2Q8WYA1 636 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 PPP1R16BQ96T49 567 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 YME1L1Q96TA2 773 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 SUGCTQ9HAC7 445 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 CDHR5Q9HBB8 845 aa26.98■■□□□ 1.91
SSBP4-201ENST00000270061 ENPP3O14638 875 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 STBD1O95210 358 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 IGFBP4P22692 258 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 CACNB1Q02641 598 aaPredicted RBP26.97■■□□□ 1.91
SSBP4-201ENST00000270061 RAD51AP2Q09MP3 1159 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 FAM114A1Q8IWE2 563 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 LRRC8AQ8IWT6 810 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 LINC01465Q8N7H1 131 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 CACTINQ8WUQ7 758 aaKnown RBP26.97■■□□□ 1.91
SSBP4-201ENST00000270061 RRAGDQ9NQL2 400 aaPredicted RBP26.97■■□□□ 1.91
SSBP4-201ENST00000270061 ODF2LQ9ULJ1 636 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 NLRC5Q86WI3 1866 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 TMEM150BA6NC51 233 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 ZNF500O60304 480 aaPredicted RBP26.97■■□□□ 1.91
SSBP4-201ENST00000270061 RPS6KA5O75582 802 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 GUCY2CP25092 1073 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 CRYBB1P53674 252 aaPredicted RBP26.97■■□□□ 1.91
SSBP4-201ENST00000270061 GLIS3Q8NEA6 775 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 OSMRQ99650 979 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 OLFML3Q9NRN5 406 aa26.97■■□□□ 1.91
SSBP4-201ENST00000270061 LINC01553A4QN01 128 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 ARHGEF35A5YM69 484 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 TBCAO75347 108 aaKnown RBP26.96■■□□□ 1.91
SSBP4-201ENST00000270061 GPR32O75388 356 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 FGFR1OPO95684 399 aaKnown RBP26.96■■□□□ 1.91
SSBP4-201ENST00000270061 COPB1P53618 953 aaKnown RBP26.96■■□□□ 1.91
SSBP4-201ENST00000270061 NFX1Q12986 1120 aaKnown RBP26.96■■□□□ 1.91
SSBP4-201ENST00000270061 ZCWPW2Q504Y3 356 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 ANO5Q75V66 913 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 ZNF710Q8N1W2 664 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 CCDC150Q8NCX0 1101 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 TMEM40Q8WWA1 233 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 SH2D3AQ9BRG2 576 aa26.96■■□□□ 1.91
SSBP4-201ENST00000270061 MAGEC2Q9UBF1 373 aaPredicted RBP26.96■■□□□ 1.91
SSBP4-201ENST00000270061 NOC2LQ9Y3T9 749 aaKnown RBP26.96■■□□□ 1.91
SSBP4-201ENST00000270061 PBX1P40424 430 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 ZNF131P52739 623 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 ODR4Q5SWX8 454 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 SPECC1LQ69YQ0 1117 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 EPM2AIP1Q7L775 607 aaPredicted RBP26.95■■□□□ 1.9
SSBP4-201ENST00000270061 SPRED2Q7Z698 418 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 SCFD1Q8WVM8 642 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 TSG101Q99816 390 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 SEL1LQ9UBV2 794 aa26.95■■□□□ 1.9
SSBP4-201ENST00000270061 NLRP11P59045 1033 aaKnown RBP26.94■■□□□ 1.9
SSBP4-201ENST00000270061 TBX2Q13207 712 aaPredicted RBP26.94■■□□□ 1.9
SSBP4-201ENST00000270061 SFR1Q86XK3 245 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 SP7Q8TDD2 431 aaPredicted RBP26.94■■□□□ 1.9
SSBP4-201ENST00000270061 TGS1Q96RS0 853 aaKnown RBP26.94■■□□□ 1.9
SSBP4-201ENST00000270061 FGFBP2Q9BYJ0 223 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 ZHX3Q9H4I2 956 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 ANKEF1Q9NU02 776 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 TBC1D7Q9P0N9 293 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 ARID2Q68CP9 1835 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 COL4A4P53420 1690 aaPredicted RBP26.94■■□□□ 1.9
SSBP4-201ENST00000270061 EPOPA6NHQ4 379 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 RFXAPO00287 272 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 FAM43BQ6ZT52 329 aaPredicted RBP26.94■■□□□ 1.9
SSBP4-201ENST00000270061 LINC01599Q8WXQ3 324 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 CEP89Q96ST8 783 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 TSPYL2Q9H2G4 693 aaPredicted RBP26.94■■□□□ 1.9
SSBP4-201ENST00000270061 MTUS1Q9ULD2 1270 aa26.94■■□□□ 1.9
SSBP4-201ENST00000270061 GPR182O15218 404 aa26.93■■□□□ 1.9
SSBP4-201ENST00000270061 FAM13AO94988 1023 aa26.93■■□□□ 1.9
SSBP4-201ENST00000270061 YWHABP31946 246 aaKnown RBP26.93■■□□□ 1.9
SSBP4-201ENST00000270061 RARRES1P49788 294 aa26.93■■□□□ 1.9
SSBP4-201ENST00000270061 BMT2Q1RMZ1 405 aa26.93■■□□□ 1.9
SSBP4-201ENST00000270061 PLA2G4FQ68DD2 849 aa26.93■■□□□ 1.9
SSBP4-201ENST00000270061 RTN4RL1Q86UN2 441 aaPredicted RBP26.93■■□□□ 1.9
SSBP4-201ENST00000270061 PARVGQ9HBI0 331 aa26.93■■□□□ 1.9
SSBP4-201ENST00000270061 ERVK-5Q9HDB9 667 aa26.93■■□□□ 1.9
SSBP4-201ENST00000270061 N4BP3O15049 544 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 TEX33O43247 280 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 DNM2P50570 870 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 ERVK-21P61565 698 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 PADI6Q6TGC4 694 aa26.92■■□□□ 1.9
SSBP4-201ENST00000270061 PPP4R3CPQ6ZMV5 832 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 377 ms