RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RARAP10276 462 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 COILP38432 576 aaPredicted RBP29.56■■■□□ 2.32
CBX4-201ENST00000269397 SYDE2Q5VT97 1194 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 C11orf63Q6NUN7 778 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 MKL1Q969V6 931 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 TACO1Q9BSH4 297 aaKnown RBP29.56■■■□□ 2.32
CBX4-201ENST00000269397 TCP11X1B4DZS4 312 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 SGPL1O95470 568 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 CFBP00751 764 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 SLC15A2Q16348 729 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 ZSWIM2Q8NEG5 633 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 CTNNAL1Q9UBT7 734 aa29.56■■■□□ 2.32
CBX4-201ENST00000269397 BCRP11274 1271 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 RARGP13631 454 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 PPP3CAQ08209 521 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 PPP2R5AQ15172 486 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 NSMFQ6X4W1 530 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 ANKRD42Q8N9B4 389 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 TEKT1Q969V4 418 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 NYAP2Q9P242 653 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 SPOPO43791 374 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 SNX1Q13596 522 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 DONSONQ9NYP3 566 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 BTAF1O14981 1849 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 PFASO15067 1338 aa29.55■■■□□ 2.32
CBX4-201ENST00000269397 SNX3O60493 162 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 ART4Q93070 314 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 KCNQ5Q9NR82 932 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 PARP2Q9UGN5 583 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 STK24Q9Y6E0 443 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 AFF2P51816 1311 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 DLATP10515 647 aaKnown RBP29.54■■■□□ 2.32
CBX4-201ENST00000269397 TBC1D10BQ4KMP7 808 aaPredicted RBP29.54■■■□□ 2.32
CBX4-201ENST00000269397 SLC13A5Q86YT5 568 aaPredicted RBP29.54■■■□□ 2.32
CBX4-201ENST00000269397 C1orf54Q8WWF1 131 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 ZC3H12CQ9C0D7 883 aaKnown RBP29.54■■■□□ 2.32
CBX4-201ENST00000269397 COA1Q9GZY4 146 aa29.54■■■□□ 2.32
CBX4-201ENST00000269397 CDC42EP4Q9H3Q1 356 aaKnown RBP29.54■■■□□ 2.32
CBX4-201ENST00000269397 GREB1LQ9C091 1923 aaPredicted RBP29.53■■■□□ 2.32
CBX4-201ENST00000269397 GSTA1P08263 222 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 CLNS1AP54105 237 aaKnown RBP29.53■■■□□ 2.32
CBX4-201ENST00000269397 SLMAPQ14BN4 828 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 NFIL3Q16649 462 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 GDAP1Q8TB36 358 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 ELMO3Q96BJ8 720 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 ALAS1P13196 640 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 HSPA6P17066 643 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 GBP2P32456 591 aaPredicted RBP29.53■■■□□ 2.32
CBX4-201ENST00000269397 ADCY1Q08828 1119 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 MYO1EQ12965 1108 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 CLUL1Q15846 466 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 TAOK1Q7L7X3 1001 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 KIF2BQ8N4N8 673 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 ARHGEF2Q92974 986 aaKnown RBP29.53■■■□□ 2.32
CBX4-201ENST00000269397 NSRP1Q9H0G5 558 aaKnown RBP29.53■■■□□ 2.32
CBX4-201ENST00000269397 CCDC134Q9H6E4 229 aa29.53■■■□□ 2.32
CBX4-201ENST00000269397 TMEM120BA0PK00 339 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 ATP6V0A4Q9HBG4 840 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 TUFT1Q9NNX1 390 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 KCNK9Q9NPC2 374 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 MYH11P35749 1972 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 PSMD10O75832 226 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 ZKSCAN8Q15776 578 aaPredicted RBP29.52■■■□□ 2.32
CBX4-201ENST00000269397 TNFAIP8L3Q5GJ75 292 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 SAMD1Q6SPF0 538 aaPredicted RBP29.52■■■□□ 2.32
CBX4-201ENST00000269397 NOP9Q86U38 636 aaKnown RBP29.52■■■□□ 2.32
CBX4-201ENST00000269397 THOC1Q96FV9 657 aaKnown RBP29.52■■■□□ 2.32
CBX4-201ENST00000269397 C10orf71Q711Q0 1435 aa29.52■■■□□ 2.32
CBX4-201ENST00000269397 CLDN3O15551 220 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 GAS7O60861 476 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 PDE6CP51160 858 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 HADHBP55084 474 aaKnown RBP29.51■■■□□ 2.32
CBX4-201ENST00000269397 JAG1P78504 1218 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 SIX1Q15475 284 aaPredicted RBP29.51■■■□□ 2.32
CBX4-201ENST00000269397 TRIP13Q15645 432 aaPredicted RBP29.51■■■□□ 2.32
CBX4-201ENST00000269397 NUGGCQ68CJ6 796 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 TLDC1Q6P9B6 456 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 PRCCQ92733 491 aaPredicted RBP29.51■■■□□ 2.32
CBX4-201ENST00000269397 NUP85Q9BW27 656 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 TAOK3Q9H2K8 898 aa29.51■■■□□ 2.32
CBX4-201ENST00000269397 PASKQ96RG2 1323 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 HIP1RO75146 1068 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 GH1P01241 217 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 GYS1P13807 737 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 CHKAP35790 457 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 RBM5P52756 815 aaKnown RBP eCLIP29.51■■■□□ 2.31
CBX4-201ENST00000269397 BTNL9Q6UXG8 535 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 SH3BP5LQ7L8J4 393 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 KIAA0825Q8IV33 1275 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 MIEF2Q96C03 454 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 FAM212AQ96EL1 285 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 TMEM109Q9BVC6 243 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 STMN4Q9H169 189 aaPredicted RBP29.51■■■□□ 2.31
CBX4-201ENST00000269397 ECT2Q9H8V3 914 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 MTUS1Q9ULD2 1270 aa29.51■■■□□ 2.31
CBX4-201ENST00000269397 DDX39AO00148 427 aaKnown RBP29.5■■■□□ 2.31
CBX4-201ENST00000269397 CHRNB2P17787 502 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 CRKP46108 304 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 NCALDP61601 193 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 CALCOCO2Q13137 446 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms