RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 UBE3CQ15386 1083 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 DDX50Q9BQ39 737 aaKnown RBP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 SLC7A5P2Q9GIP4 190 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 EIF4E1BA6NMX2 242 aaKnown RBP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 AKAP10O43572 662 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 STXBP2Q15833 593 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 HEATR6Q6AI08 1181 aaKnown RBP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 IYDQ6PHW0 289 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 SRLQ86TD4 932 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 AGGF1Q8N302 714 aaeCLIP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 KLHL25Q9H0H3 589 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 FAM107AO95990 144 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 DDIASQ8IXT1 998 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 EGFL8Q99944 293 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 FAM129AQ9BZQ8 928 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
SRRM4-201ENST00000267260 ROR1Q01973 937 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 EPS8L2Q9H6S3 715 aa12.79□□□□□ -0.36
SRRM4-201ENST00000267260 PSMD3O43242 534 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 PRAMEP78395 509 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 CARD9Q9H257 536 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 TNPO2O14787 897 aaKnown RBP12.78□□□□□ -0.36
SRRM4-201ENST00000267260 OTUD7AQ8TE49 926 aaPredicted RBP12.78□□□□□ -0.36
SRRM4-201ENST00000267260 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 EPN3Q9H201 632 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 SYNDIG1LA6NDD5 238 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 ZNF197O14709 1029 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 GPS1Q13098 491 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 PLEKHA8Q96JA3 519 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 HIC2Q96JB3 615 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRRM4-201ENST00000267260 RWDD3Q9Y3V2 267 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 FAM187AA6NFU0 413 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 TRIM49P0CI25 452 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 TRIM49CP0CI26 452 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 FBLN1P23142 703 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 JAK3P52333 1124 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 POU5F1BQ06416 359 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
SRRM4-201ENST00000267260 VPS11Q9H270 941 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 CLEC4MQ9H2X3 399 aaPredicted RBP12.78□□□□□ -0.36
SRRM4-201ENST00000267260 ABHD10Q9NUJ1 306 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 PLCG1P19174 1290 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 ALKBH5Q6P6C2 394 aaKnown RBP12.78□□□□□ -0.36
SRRM4-201ENST00000267260 LRRC49Q8IUZ0 686 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 TSPAN17Q96FV3 270 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 OLFM1Q99784 485 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 CLIC2O15247 247 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 CASS4Q9NQ75 786 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 CIAO1O76071 339 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 KRT31Q15323 416 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 MSTO1Q9BUK6 570 aa12.78□□□□□ -0.36
SRRM4-201ENST00000267260 SMG5Q9UPR3 1016 aaKnown RBP12.78□□□□□ -0.36
SRRM4-201ENST00000267260 A0A0D9SFI3 127 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 BIRC5O15392 142 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 DMPKQ09013 629 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 ENOSF1Q7L5Y1 443 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 DDI1Q8WTU0 396 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 DNAJC9Q8WXX5 260 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.77□□□□□ -0.36
SRRM4-201ENST00000267260 ADAM22Q9P0K1 906 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 ATAD3BQ5T9A4 648 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 SP110Q9HB58 689 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 HEY1Q9Y5J3 304 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 USP19O94966 1318 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 NEMP1O14524 444 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 CCNE1P24864 410 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 MB21D1Q8N884 522 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 IL17RAQ96F46 866 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 DEPDC7Q96QD5 511 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.36
SRRM4-201ENST00000267260 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.36
SRRM4-201ENST00000267260 KYAT1Q16773 422 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 MEI1Q5TIA1 1274 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 CCNYL1Q8N7R7 359 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 MRPL48Q96GC5 212 aaKnown RBP12.77□□□□□ -0.37
SRRM4-201ENST00000267260 SLC13A1Q9BZW2 595 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 SLITRK6Q9H5Y7 841 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 ANO9A1A5B4 782 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 CHL1O00533 1208 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 DNALI1O14645 258 aaPredicted RBP12.77□□□□□ -0.37
SRRM4-201ENST00000267260 MFAP3LO75121 409 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 NCKAP1LP55160 1127 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 NUP107P57740 925 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 ZNF699Q32M78 642 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 WLSQ5T9L3 541 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 DSTYKQ6XUX3 929 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 INPP5DQ92835 1189 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms