RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 RNASELQ05823 741 aaKnown RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 SMC1AQ14683 1233 aaKnown RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 CBX2Q14781 532 aaPredicted RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 HERC4Q5GLZ8 1057 aaPredicted RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 DDX53Q86TM3 631 aaKnown RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 CATSPER3Q86XQ3 398 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 ZNF280BQ86YH2 543 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 VPS52Q8N1B4 723 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 FBXO18Q8NFZ0 1043 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 ASAP3Q8TDY4 903 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 PIGOQ8TEQ8 1089 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 SLC39A7Q92504 469 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 TMEM169Q96HH4 297 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 C8orf76Q96K31 380 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 ZSCAN31Q96LW9 406 aaPredicted RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 PHF7Q9BWX1 381 aaPredicted RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 FOXP1Q9H334 677 aaPredicted RBP10.82□□□□□ -0.68
VPS41-201ENST00000265745 KANSL3Q9P2N6 904 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 MUTYHQ9UIF7 546 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 IRAK3Q9Y616 596 aa10.82□□□□□ -0.68
VPS41-201ENST00000265745 TSPAN1O60635 241 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 CLASP2O75122 1294 aaKnown RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 DDHD2O94830 711 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 ERLIN2O94905 339 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 ALDH2P05091 517 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 CENPBP07199 599 aaPredicted RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 CTSAP10619 480 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 NCLP19338 710 aaKnown RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 GLRA2P23416 452 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 AXLP30530 894 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 CLCN1P35523 988 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 SLC11A1P49279 550 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 RBM25P49756 843 aaKnown RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 MBTD1Q05BQ5 628 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 NCBP1Q09161 790 aaKnown RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 TFDP1Q14186 410 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 BMS1Q14692 1282 aaKnown RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 ZNF174Q15697 407 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 C8orf34Q49A92 452 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 LLGL2Q6P1M3 1020 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 SMG8Q8ND04 991 aaKnown RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 CNNM3Q8NE01 707 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 ARID3AQ99856 593 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 NFKBIZQ9BYH8 718 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 ZBP1Q9H171 429 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 RSAD1Q9HA92 442 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 SH2B1Q9NRF2 756 aaPredicted RBP10.81□□□□□ -0.68
VPS41-201ENST00000265745 DNAJB4Q9UDY4 337 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 HCFC2Q9Y5Z7 792 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 CNTNAP2Q9UHC6 1331 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 RALGAPA2Q2PPJ7 1873 aa10.81□□□□□ -0.68
VPS41-201ENST00000265745 EVPLQ92817 2033 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 INO80B-WBP1J3KQ70 363 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 INPPL1O15357 1258 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 MED24O75448 989 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 PLA2G5P39877 138 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 HMGN5P82970 282 aaKnown RBP10.8□□□□□ -0.68
VPS41-201ENST00000265745 ORC2Q13416 577 aaPredicted RBP10.8□□□□□ -0.68
VPS41-201ENST00000265745 CAPSQ13938 189 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
VPS41-201ENST00000265745 NOTUMQ6P988 496 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 URGCPQ8TCY9 931 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 CASP10Q92851 521 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 CCDC51Q96ER9 411 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 CPB2Q96IY4 423 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 RPGRIP1Q96KN7 1286 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 NACC1Q96RE7 527 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 PHOX2BQ99453 314 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 POLR3CQ9BUI4 534 aaPredicted RBP10.8□□□□□ -0.68
VPS41-201ENST00000265745 APOL5Q9BWW9 433 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 VN1R3Q9BXE9 311 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 EIF2AQ9BY44 585 aaKnown RBP10.8□□□□□ -0.68
VPS41-201ENST00000265745 GBP3Q9H0R5 595 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 CSRNP2Q9H175 543 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 TUFT1Q9NNX1 390 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 UBN1Q9NPG3 1134 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 DBR1Q9UK59 544 aaKnown RBP10.8□□□□□ -0.68
VPS41-201ENST00000265745 HCN4Q9Y3Q4 1203 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 IPPQ9Y573 584 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 PCDHGA10Q9Y5H3 936 aa10.8□□□□□ -0.68
VPS41-201ENST00000265745 A0A1B0GUA9 196 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.79□□□□□ -0.68
VPS41-201ENST00000265745 ARL5CA6NH57 179 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 B4GALT5O43286 388 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 USO1O60763 962 aaKnown RBP10.79□□□□□ -0.68
VPS41-201ENST00000265745 LILRB3O75022 631 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 POMCP01189 267 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 OR52Z1P0C646 297 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 ITGA4P13612 1032 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 ARF4P18085 180 aaPredicted RBP10.79□□□□□ -0.68
VPS41-201ENST00000265745 RPA1P27694 616 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 TRAPPC10P48553 1259 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 GIT2Q14161 759 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 TTC38Q5R3I4 469 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 MAEAQ7L5Y9 396 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 NOSTRINQ8IVI9 506 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 C4orf32Q8N8J7 132 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 SLC22A17Q8WUG5 538 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms