RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 IFNA8P32881 189 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 TXNRD1Q16881 649 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 HEATR6Q6AI08 1181 aaKnown RBP19.09■□□□□ 0.65
COL5A3-201ENST00000264828 NEUROG2Q9H2A3 272 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 ZNF711Q9Y462 761 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 CPSF1Q10570 1443 aaKnown RBP19.09■□□□□ 0.65
COL5A3-201ENST00000264828 CHRNA3P32297 505 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 TRAF3IP3Q9Y228 551 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 TNS3Q68CZ2 1445 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 GOLGA8RI6L899 631 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 ZSCAN9O15535 394 aaPredicted RBP19.09■□□□□ 0.65
COL5A3-201ENST00000264828 FBXW4P57775 412 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 AP3B2Q13367 1082 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 CYTH1Q15438 398 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 KNOP1Q1ED39 458 aaKnown RBP19.09■□□□□ 0.65
COL5A3-201ENST00000264828 ZNF579Q8NAF0 562 aaKnown RBP19.09■□□□□ 0.65
COL5A3-201ENST00000264828 EGFL8Q99944 293 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 BRIP1Q9BX63 1249 aa19.09■□□□□ 0.65
COL5A3-201ENST00000264828 MRPL40Q9NQ50 206 aaKnown RBP19.09■□□□□ 0.65
COL5A3-201ENST00000264828 DENND3A2RUS2 1198 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 USP17L10C9JJH3 530 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 PYGLP06737 847 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 KCNA4P22459 653 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 ADORA2BP29275 332 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 KRT17Q04695 432 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 MTF1Q14872 753 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 KLC4Q9NSK0 619 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 IP6K2Q9UHH9 426 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 F8W8V4 182 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 ZBTB5O15062 677 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 FASTKD1Q53R41 847 aaKnown RBP19.08■□□□□ 0.65
COL5A3-201ENST00000264828 THEM5Q8N1Q8 247 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 COL15A1P39059 1388 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 NDUFAF2Q8N183 169 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 DCAF4Q8WV16 495 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 CASS4Q9NQ75 786 aa19.08■□□□□ 0.65
COL5A3-201ENST00000264828 CLTCQ00610 1675 aaKnown RBP19.08■□□□□ 0.65
COL5A3-201ENST00000264828 UBA6A0AVT1 1052 aaPredicted RBP19.08■□□□□ 0.64
COL5A3-201ENST00000264828 SUPT3HO75486 399 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 ENO1P06733 434 aaKnown RBP19.08■□□□□ 0.64
COL5A3-201ENST00000264828 RTKN2Q8IZC4 609 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 MS4A14Q96JA4 679 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 CDC27P30260 824 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 RAP1GDS1P52306 607 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 TMEM47Q9BQJ4 181 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 AURKCQ9UQB9 309 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 LZTS1Q9Y250 596 aa19.08■□□□□ 0.64
COL5A3-201ENST00000264828 TCP11X1B4DZS4 312 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 ARHGEF9O43307 516 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 DYNC1I2Q13409 638 aaKnown RBP19.07■□□□□ 0.64
COL5A3-201ENST00000264828 CHCHD3Q9NX63 227 aaKnown RBP19.07■□□□□ 0.64
COL5A3-201ENST00000264828 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 FAM196BA6NMK8 535 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 VCPP55072 806 aaKnown RBP19.07■□□□□ 0.64
COL5A3-201ENST00000264828 NAALADL2Q58DX5 795 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 RNF219Q5W0B1 726 aaPredicted RBP19.07■□□□□ 0.64
COL5A3-201ENST00000264828 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 SDC4P31431 198 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 GCOM2Q9BZD3 368 aaPredicted RBP19.07■□□□□ 0.64
COL5A3-201ENST00000264828 AMACRQ9UHK6 382 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 PIK3R2O00459 728 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 FCER1AP12319 257 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 RFWD2Q8NHY2 731 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 COA1Q9GZY4 146 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 OSBPL5Q9H0X9 879 aaPredicted RBP19.07■□□□□ 0.64
COL5A3-201ENST00000264828 H7C1W4 665 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 KDSRQ06136 332 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 GLYCTKQ8IVS8 523 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 AFG1LQ8WV93 481 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 SLC9A2Q9UBY0 812 aa19.07■□□□□ 0.64
COL5A3-201ENST00000264828 ABCA6Q8N139 1617 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 TRIM49P0CI25 452 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 TRIM49CP0CI26 452 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 MAPK6Q16659 721 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 DCAF4L1Q3SXM0 396 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 KDELC2Q7Z4H8 507 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 DTX3LQ8TDB6 740 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 ZC3H15Q8WU90 426 aaKnown RBP19.06■□□□□ 0.64
COL5A3-201ENST00000264828 LY9Q9HBG7 655 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 NRKQ7Z2Y5 1582 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 MOCS2O96007 188 aaPredicted RBP19.06■□□□□ 0.64
COL5A3-201ENST00000264828 ARSEP51690 589 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 NEK2P51955 445 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 CIAPIN1Q6FI81 312 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 RHPN2Q8IUC4 686 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 RMDN3Q96TC7 470 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 HPCAL4Q9UM19 191 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 ZNF521Q96K83 1311 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 WNT8AQ9H1J5 351 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 HUS1O60921 280 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 CAPRIN2Q6IMN6 1127 aaKnown RBP19.06■□□□□ 0.64
COL5A3-201ENST00000264828 WDR24Q96S15 920 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 LRRC1Q9BTT6 524 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 DHX35Q9H5Z1 703 aaKnown RBP19.06■□□□□ 0.64
COL5A3-201ENST00000264828 HSPA9P38646 679 aaKnown RBP19.06■□□□□ 0.64
COL5A3-201ENST00000264828 TMEM179Q6ZVK1 233 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 SLC44A5Q8NCS7 719 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 OTULINQ96BN8 352 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 TEX12Q9BXU0 123 aa19.06■□□□□ 0.64
COL5A3-201ENST00000264828 STK36Q9NRP7 1315 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms