RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MTA2O94776 668 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 NPTXRO95502 500 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 CNGA1P29973 690 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 ABL2P42684 1182 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 PEX5P50542 639 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 KCTD19Q17RG1 926 aaPredicted RBP13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 SPDYAQ5MJ70 313 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 GPATCH4Q5T3I0 446 aaKnown RBP13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 SLF2Q8IX21 1173 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 ADGRF4Q8IZF3 695 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 C7orf43Q8WVR3 580 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 FAM167BQ9BTA0 163 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 VCXQ9H320 206 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 ADGRA3Q8IWK6 1321 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 MPHOSPH10O00566 681 aaKnown RBP13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 ZBTB5O15062 677 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 CLIC2O15247 247 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 CDH16O75309 829 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 ACSL3O95573 720 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 FTLP02792 175 aaPredicted RBP13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 POLGP54098 1239 aaPredicted RBP13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 YARSP54577 528 aaKnown RBP13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 RAD23BP54727 409 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 MXRA7P84157 204 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 ZNF543Q08ER8 600 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 NR1H3Q13133 447 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 HS2ST1Q7LGA3 356 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 RIBC1Q8N443 379 aaPredicted RBP13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 ENDOVQ8N8Q3 282 aaKnown RBP13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 GDAP1Q8TB36 358 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 GRK7Q8WTQ7 553 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 GJA10Q969M2 543 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 RMDN2Q96LZ7 410 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 PTPN22Q9Y2R2 807 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 MYO3BQ8WXR4 1341 aa13.27□□□□□ -0.28
CHMP2B-201ENST00000263780 SMIM24O75264 130 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 ACADSP16219 412 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 COMTP21964 271 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 BTDP43251 543 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 PAPOLAP51003 745 aaKnown RBP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 CTTNQ14247 550 aaKnown RBP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 ZRSR2Q15696 482 aaKnown RBP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 ECHDC2Q86YB7 292 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 KRT35Q92764 455 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 SNF8Q96H20 258 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 LRRC37BQ96QE4 947 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 TRIM33Q9UPN9 1127 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 UBE4BO95155 1302 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 NAV1Q8NEY1 1877 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 GPR75-ASB3A0A0A6YYF3 556 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 EME2A4GXA9 379 aaPredicted RBP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 MAGEB2O15479 319 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 CETN1Q12798 172 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 TRAF1Q13077 416 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 STAT4Q14765 748 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 RNF207Q6ZRF8 634 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 KCNV2Q8TDN2 545 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 DDX23Q9BUQ8 820 aaKnown RBP13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 GPR88Q9GZN0 384 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 BTG4Q9NY30 223 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 TAS2R14Q9NYV8 317 aa13.27□□□□□ -0.29
CHMP2B-201ENST00000263780 THAP12O43422 761 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 SPOPO43791 374 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 TPBGLP0DKB5 382 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 TAC1P20366 129 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 CDC25CP30307 473 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 RFC4P35249 363 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 MYL7Q01449 175 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 ROR2Q01974 943 aaKnown RBP13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 KLC1Q07866 573 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 AP3B2Q13367 1082 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 MESDQ14696 234 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 AADACL2Q6P093 401 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 DHX37Q8IY37 1157 aaKnown RBP13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 BBOF1Q8ND07 529 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 ZBTB10Q96DT7 871 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 FAM20AQ96MK3 541 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 NUDCD1Q96RS6 583 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 UBN1Q9NPG3 1134 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 PAPOLBQ9NRJ5 636 aaKnown RBP13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 ASIC3Q9UHC3 531 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 TGFB1I1O43294 461 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 FAM13AO94988 1023 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 PYGMP11217 842 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 STAT3P40763 770 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 ARHGAP44Q17R89 818 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 UBAP2Q5T6F2 1119 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms