RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 LMBRD2Q68DH5 695 aaPredicted RBP20.7■□□□□ 0.9
FAM20B-201ENST00000263733 ICA1LQ8NDH6 482 aa20.7■□□□□ 0.9
FAM20B-201ENST00000263733 RMDN2Q96LZ7 410 aa20.7■□□□□ 0.9
FAM20B-201ENST00000263733 RAD17O75943 681 aa20.7■□□□□ 0.9
FAM20B-201ENST00000263733 NRBF2Q96F24 287 aa20.7■□□□□ 0.9
FAM20B-201ENST00000263733 CD44P16070 742 aaKnown RBP20.7■□□□□ 0.9
FAM20B-201ENST00000263733 DYNC1I2Q13409 638 aaKnown RBP20.7■□□□□ 0.9
FAM20B-201ENST00000263733 L1RE1Q9UN81 338 aa20.7■□□□□ 0.9
FAM20B-201ENST00000263733 GLI2P10070 1586 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 COPS2P61201 443 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 TAF1BQ53T94 588 aaPredicted RBP20.69■□□□□ 0.9
FAM20B-201ENST00000263733 SLC27A3Q5K4L6 730 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 KRT39Q6A163 491 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 GRAMD4Q6IC98 578 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 ADCY10Q96PN6 1610 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 CCT8L1PA6NM43 557 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 NVLO15381 856 aaKnown RBP20.69■□□□□ 0.9
FAM20B-201ENST00000263733 STAT4Q14765 748 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 C16orf87Q6PH81 154 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 TMEM179Q6ZVK1 233 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 USP38Q8NB14 1042 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 SH3GL3Q99963 347 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 UBE4BO95155 1302 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 SCP2P22307 547 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 KCNJ1P48048 391 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 TFDP2Q14188 446 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 SLFN12LQ6IEE8 588 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 RASSF3Q86WH2 238 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 SIX6OS1Q8N1H7 587 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 C7orf25Q9BPX7 421 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 SH2D3AQ9BRG2 576 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 UBN1Q9NPG3 1134 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 PHF2O75151 1096 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 DEUP1Q05D60 604 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 MTM1Q13496 603 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 AGBL2Q5U5Z8 902 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 GIMAP8Q8ND71 665 aaPredicted RBP20.69■□□□□ 0.9
FAM20B-201ENST00000263733 DCAF4Q8WV16 495 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 RPS6KC1Q96S38 1066 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 SLC9A2Q9UBY0 812 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 CHORDC1Q9UHD1 332 aaPredicted RBP20.69■□□□□ 0.9
FAM20B-201ENST00000263733 PNPLA7Q6ZV29 1317 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 TMEM120BA0PK00 339 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 GGPS1O95749 300 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 ZBTB41Q5SVQ8 909 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 ANO5Q75V66 913 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 KLHL8Q9P2G9 620 aaPredicted RBP20.69■□□□□ 0.9
FAM20B-201ENST00000263733 PFASO15067 1338 aa20.69■□□□□ 0.9
FAM20B-201ENST00000263733 PALM3A6NDB9 673 aaPredicted RBP20.68■□□□□ 0.9
FAM20B-201ENST00000263733 HSPA8P11142 646 aaKnown RBP20.68■□□□□ 0.9
FAM20B-201ENST00000263733 ACAD11Q709F0 780 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 JAMLQ86YT9 394 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 IQGAP3Q86VI3 1631 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 IGF2BP3O00425 579 aaKnown RBP eCLIP20.68■□□□□ 0.9
FAM20B-201ENST00000263733 ORC4O43929 436 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 CALB1P05937 261 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 OR6B3Q8NGW1 331 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 CDHR1Q96JP9 859 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 LXNQ9BS40 222 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 ATL2Q8NHH9 583 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 MARCOQ9UEW3 520 aaPredicted RBP20.68■□□□□ 0.9
FAM20B-201ENST00000263733 TRAF3IP3Q9Y228 551 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 ZBTB12Q9Y330 459 aaPredicted RBP20.68■□□□□ 0.9
FAM20B-201ENST00000263733 PDS5AQ29RF7 1337 aaKnown RBP20.68■□□□□ 0.9
FAM20B-201ENST00000263733 CDHR2Q9BYE9 1310 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 HSD17B3P37058 310 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 YWHAHQ04917 246 aaPredicted RBP20.68■□□□□ 0.9
FAM20B-201ENST00000263733 TMEM154Q6P9G4 183 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 PPP1R36Q96LQ0 422 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 RNF103-CHMP3A0A140T963 221 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 STXBP3O00186 592 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 RSPH3Q86UC2 560 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.68■□□□□ 0.93e-6■■■■■ 50.8
FAM20B-201ENST00000263733 RBM15Q96T37 977 aaKnown RBP eCLIP20.68■□□□□ 0.93e-11■■□□□ 14.3
FAM20B-201ENST00000263733 IP6K2Q9UHH9 426 aa20.68■□□□□ 0.9
FAM20B-201ENST00000263733 CUL3Q13618 768 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 NAB2Q15742 525 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 KYNUQ16719 465 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 P3H1Q32P28 736 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 PITPNM2Q9BZ72 1349 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 PSMC1P62191 440 aaKnown RBP20.67■□□□□ 0.9
FAM20B-201ENST00000263733 SEMA3FQ13275 785 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 ZNF699Q32M78 642 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 C1orf228Q6PIY5 440 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 TRAPPC11Q7Z392 1133 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 ATXN7L3BQ96GX2 97 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 ZNF668Q96K58 619 aaPredicted RBP20.67■□□□□ 0.9
FAM20B-201ENST00000263733 ISCUQ9H1K1 167 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 EPB41L4AQ9HCS5 686 aaPredicted RBP20.67■□□□□ 0.9
FAM20B-201ENST00000263733 RTN2O75298 545 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 ORC2Q13416 577 aaPredicted RBP20.67■□□□□ 0.9
FAM20B-201ENST00000263733 SLC29A2Q14542 456 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 KCTD2Q14681 263 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 EZH2Q15910 746 aaKnown RBP20.67■□□□□ 0.9
FAM20B-201ENST00000263733 HIF1AQ16665 826 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 CASKIN2Q8WXE0 1202 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 FAM84BQ96KN1 310 aaPredicted RBP20.67■□□□□ 0.9
FAM20B-201ENST00000263733 ZNF341Q9BYN7 854 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 ZNF711Q9Y462 761 aa20.67■□□□□ 0.9
FAM20B-201ENST00000263733 TET3O43151 1660 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms