RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 KRT31Q15323 416 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 AMHR2Q16671 573 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 TRIM71Q2Q1W2 868 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 SEZ6Q53EL9 994 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 TCP11X2Q5H9J9 407 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 ARMCX5Q6P1M9 558 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 SLC39A5Q6ZMH5 540 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 APTXQ7Z2E3 356 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 ZNF410Q86VK4 478 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 ZC3H3Q8IXZ2 948 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 NME8Q8N427 588 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 POMGNT1Q8WZA1 660 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 PAWRQ96IZ0 340 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 CNOT6LQ96LI5 555 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 NAP1L5Q96NT1 182 aaPredicted RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 NFKBIZQ9BYH8 718 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 CELF4Q9BZC1 486 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 GCOM2Q9BZD3 368 aaPredicted RBP10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 THAP9Q9H5L6 903 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 DMAC2Q9NW81 257 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 TAB2Q9NYJ8 693 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 HSPBP1Q9NZL4 362 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 IFNKQ9P0W0 207 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 ANKFY1Q9P2R3 1169 aa10.65□□□□□ -0.7
SNRNP40-201ENST00000263694 ACKR2O00590 384 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 CETN3O15182 167 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 MAP3K13O43283 966 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 TSPAN1O60635 241 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 EXOC3O60645 756 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 PQBP1O60828 265 aaKnown RBP10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 COL6A1P12109 1028 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 CCDC40Q4G0X9 1142 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 ZBTB41Q5SVQ8 909 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 ZNF618Q5T7W0 954 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 ATF7IP2Q5U623 682 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 CATSPER4Q7RTX7 472 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 SRGAP1Q7Z6B7 1085 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 FILIP1Q7Z7B0 1213 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM126BQ8IXS8 530 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 KCNN1Q92952 543 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 MRPL4Q9BYD3 311 aaKnown RBP10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 TRIM5Q9C035 493 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 VPS16Q9H269 839 aa10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 NOC2LQ9Y3T9 749 aaKnown RBP10.65□□□□□ -0.71
SNRNP40-201ENST00000263694 ABLIM1O14639 778 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 ADCY5O95622 1261 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 SERPINC1P01008 464 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 CD4P01730 458 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 PIGRP01833 764 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 ARF4P18085 180 aaPredicted RBP10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 EN2P19622 333 aaPredicted RBP10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 EIF4BP23588 611 aaKnown RBP10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 MTIF2P46199 727 aaKnown RBP10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 CRYBB1P53674 252 aaPredicted RBP10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 MGAT3Q09327 533 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM187BQ17R55 369 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 TRIM60Q495X7 471 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 FOXR2Q6PJQ5 311 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 TSHZ1Q6ZSZ6 1077 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 RSPH3Q86UC2 560 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 CBWD2Q8IUF1 395 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 GOLGA5Q8TBA6 731 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM84AQ96KN4 292 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 CEP63Q96MT8 703 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 TCHPQ9BT92 498 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 XPO4Q9C0E2 1151 aaKnown RBP10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 PRMT7Q9NVM4 692 aaPredicted RBP10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 TRPV2Q9Y5S1 764 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 STYXL1Q9Y6J8 313 aa10.64□□□□□ -0.71
SNRNP40-201ENST00000263694 M0QZ92 97 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 TEX33O43247 280 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 ERLIN2O94905 339 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 FGFR1OPO95684 399 aaKnown RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 ADRB2P07550 413 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 GHRP10912 638 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 CKBP12277 381 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 PRKCSHP14314 528 aaPredicted RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 RPL13P26373 211 aaKnown RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 HOXA11P31270 313 aaPredicted RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 TNFSF9P41273 254 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 ACOT2P49753 483 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 ZNF75DP51815 510 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 COPB1P53618 953 aaKnown RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 UBASH3AP57075 661 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 CDC42EP1Q00587 391 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 TLE2Q04725 743 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 NFIL3Q16649 462 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 ZPBP2Q6X784 338 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 RPAINQ86UA6 219 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM228AQ86W67 206 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 SLC9A9Q8IVB4 645 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 C12orf56Q8IXR9 622 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM186BQ8IYM0 893 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 CEP120Q8N960 986 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 XXYLT1Q8NBI6 393 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM213AQ9BRX8 229 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 TUBGCP2Q9BSJ2 902 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms