RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 KRT5P13647 590 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 GAP43P17677 238 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 VCAM1P19320 739 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 SSR1P43307 286 aaKnown RBP9.83□□□□□ -0.84
MSH4-201ENST00000263187 MAPK7Q13164 816 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 BIRC3Q13489 604 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 BMT2Q1RMZ1 405 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 DUPD1Q68J44 220 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 FOXR2Q6PJQ5 311 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 PNMA8AQ86V59 439 aaPredicted RBP9.83□□□□□ -0.84
MSH4-201ENST00000263187 CBWD2Q8IUF1 395 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 DYDC1Q8WWB3 177 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 XPO6Q96QU8 1125 aaKnown RBP9.83□□□□□ -0.84
MSH4-201ENST00000263187 VCPKMTQ9H867 229 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 KCNK9Q9NPC2 374 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 ZDHHC18Q9NUE0 388 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 TBX3O15119 743 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 FSBPO95073 299 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 MYCLP12524 364 aaPredicted RBP9.83□□□□□ -0.84
MSH4-201ENST00000263187 VAMP7P51809 220 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 FAM102BQ5T8I3 360 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 CAPN12Q6ZSI9 719 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 TCP11Q8WWU5 503 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 HVCN1Q96D96 273 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 NACC1Q96RE7 527 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 NUP85Q9BW27 656 aa9.83□□□□□ -0.84
MSH4-201ENST00000263187 RPTORQ8N122 1335 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 ITGB5P18084 799 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 SCTRP47872 440 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 IRX3P78415 501 aaPredicted RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 ANKRD20A8PQ5CZ79 823 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 MIER3Q7Z3K6 550 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 AKT1S1Q96B36 256 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 ZNF653Q96CK0 615 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 CHMP6Q96FZ7 201 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 INTS9Q9NV88 658 aaKnown RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 A6NNZ2 444 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 NFIBO00712 420 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 CES2O00748 559 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 RGL2O15211 777 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 RPSAP08865 295 aaKnown RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 CLTAP09496 248 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 RARAP10276 462 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 BCRP11274 1271 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 EIF2AK2P19525 551 aaKnown RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 DRD4P21917 467 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 MTM1Q13496 603 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 TUBB8Q3ZCM7 444 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 DACT2Q5SW24 774 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 HIBCHQ6NVY1 386 aaPredicted RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 TATDN1Q6P1N9 297 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 C6orf89Q6UWU4 347 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 TBC1D1Q86TI0 1168 aaPredicted RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 COL23A1Q86Y22 540 aaPredicted RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 UBL4BQ8N7F7 174 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 SEMA4DQ92854 862 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 PABPC3Q9H361 631 aaKnown RBP9.82□□□□□ -0.84
MSH4-201ENST00000263187 KLHL11Q9NVR0 708 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 GRHL1Q9NZI5 618 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 ASIC3Q9UHC3 531 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 BAIAP2L1Q9UHR4 511 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 TRPC6Q9Y210 931 aa9.82□□□□□ -0.84
MSH4-201ENST00000263187 A0A0A6YYK5 440 aaPredicted RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 O00370 1275 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 PPFIA2O75334 1257 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 GJB6O95452 261 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 CIITAP33076 1130 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 NF2P35240 595 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 RDXP35241 583 aaKnown RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 GPC5P78333 572 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 ZFYVE27Q5T4F4 411 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 SEL1L2Q5TEA6 688 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 MOXD1Q6UVY6 613 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 PASD1Q8IV76 773 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 LMO3Q8TAP4 145 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 TATDN2Q93075 761 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 PAIP2Q9BPZ3 127 aaKnown RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 ZSWIM1Q9BR11 485 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 TMEM39BQ9GZU3 492 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 CARD9Q9H257 536 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 HSPBP1Q9NZL4 362 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 COL20A1Q9P218 1284 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 ADRB2P07550 413 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 NPR1P16066 1061 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 UGCGQ16739 394 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 LDHDQ86WU2 507 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 SUGP1Q8IWZ8 645 aaKnown RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 TAB3Q8N5C8 712 aaPredicted RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 ZNF564Q8TBZ8 553 aaPredicted RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 CPA5Q8WXQ8 436 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 ZKSCAN4Q969J2 545 aaPredicted RBP9.81□□□□□ -0.84
MSH4-201ENST00000263187 KREMEN1Q96MU8 473 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 TEKT3Q9BXF9 490 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 KCNH7Q9NS40 1196 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 NRXN2Q9P2S2 1712 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 EIF3DO15371 548 aaKnown RBP eCLIP9.81□□□□□ -0.84
MSH4-201ENST00000263187 ALAS1P13196 640 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 CHRNB2P17787 502 aa9.81□□□□□ -0.84
MSH4-201ENST00000263187 CHKAP35790 457 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms