RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 PAIP2BQ9ULR5 123 aaKnown RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 A0A1B0GW55 424 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DUX4L2P0CJ85 424 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DUX4L3P0CJ86 424 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DUX4L4P0CJ87 422 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DUX4L5P0CJ88 424 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DUX4L6P0CJ89 424 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DUX4L7P0CJ90 424 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 FSD1LQ9BXM9 530 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 RNF14Q9UBS8 474 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 DUX4Q9UBX2 424 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 PRPF4O43172 522 aaKnown RBP eCLIP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 PSAPP07602 524 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 HSPA1AP0DMV8 641 aaKnown RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 HSPA1BP0DMV9 641 aaKnown RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 EPHX2P34913 555 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 ARL4CP56559 192 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 SREBF2Q12772 1141 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 PPP6R3Q5H9R7 873 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 RARS2Q5T160 578 aaKnown RBP13.65□□□□□ -0.22
TTC39A-202ENST00000262676 YAF2Q8IY57 180 aa13.65□□□□□ -0.22
TTC39A-202ENST00000262676 LZTS3O60299 673 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 TMED10P49755 219 aaKnown RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 ARFIP2P53365 341 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 MAP3K10Q02779 954 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 LRRC36Q1X8D7 754 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 CFAP69A5D8W1 941 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 GAP43P17677 238 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 RECQLP46063 649 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 KRT72Q14CN4 511 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 NBPF9Q3BBW0 867 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 ETNK1Q9HBU6 452 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 KLHL8Q9P2G9 620 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 TTC7AQ9ULT0 858 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 ENO4A6NNW6 628 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 NEMP1O14524 444 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 TJP3O95049 919 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 IMPDH2P12268 514 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 ARL13BQ3SXY8 428 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 INPP5DQ92835 1189 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 ABCB11O95342 1321 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 DDNO94850 711 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 S100A5P33763 92 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 GALNT17Q6IS24 598 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 PALMO75781 387 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 PTPN12Q05209 780 aaKnown RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 ITPK1Q13572 414 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 CTTNQ14247 550 aaKnown RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 CDHR1Q96JP9 859 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 SEL1LQ9UBV2 794 aa13.64□□□□□ -0.23
TTC39A-202ENST00000262676 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-202ENST00000262676 TCF3P15923 654 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 MCAMP43121 646 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 SPATA33Q96N06 139 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 TM6SF1Q9BZW5 370 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 DIABLOQ9NR28 239 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 GDAQ9Y2T3 454 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 GMNCA6NCL1 334 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 APOA5Q6Q788 366 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 NLRP14Q86W24 1093 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 EGFL8Q99944 293 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 RNPEPQ9H4A4 650 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 DYNC1LI2O43237 492 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 BRD2P25440 801 aaKnown RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 TERF2Q15554 542 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 OR6J1Q8NGC5 347 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 TTC8Q8TAM2 541 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 HEY1Q9Y5J3 304 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 E5RI56 91 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 GSNP06396 782 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 IL10P22301 178 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 NBPF15Q8N660 670 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 DTX3LQ8TDB6 740 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 CYGBQ8WWM9 190 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 PARK7Q99497 189 aaKnown RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 OSBPL10Q9BXB5 764 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 MAGEF1Q9HAY2 307 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 ARIH2O95376 493 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 KRT7P08729 469 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 PDIA3P30101 505 aaKnown RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 PMS2P54278 862 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 ERICH1Q86X53 443 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 SCG3Q8WXD2 468 aaKnown RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 ZSWIM6Q9HCJ5 1215 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 GEMIN8Q9NWZ8 242 aaKnown RBP13.63□□□□□ -0.23
TTC39A-202ENST00000262676 PCDHA4Q9UN74 947 aa13.63□□□□□ -0.23
TTC39A-202ENST00000262676 ABCC4O15439 1325 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 GRK2P25098 689 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 STAT3P40763 770 aa13.62□□□□□ -0.23
TTC39A-202ENST00000262676 ALDH18A1P54886 795 aaKnown RBP13.62□□□□□ -0.23
TTC39A-202ENST00000262676 MED21Q13503 144 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms