RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 PTPRHQ9HD43 1115 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 HNRNPDLO14979 420 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 TOM1L1O75674 476 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 BMP6P22004 513 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 BMP8BP34820 402 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 MORC3Q14149 939 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 SKOR2Q2VWA4 1001 aaPredicted RBP18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 UBXN11Q5T124 520 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 EEF1DP3Q658K8 133 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 ISM2Q6H9L7 571 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 TWF2Q6IBS0 349 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 SLC24A5Q71RS6 500 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 BICD1Q96G01 975 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 UBE2OQ9C0C9 1292 aaKnown RBP18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 EXOC7Q9UPT5 735 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 UBE4BO95155 1302 aa18.23■□□□□ 0.51
CHCHD3-201ENST00000262570 A0A0U1RQF3 1178 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 C9IYK1 514 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 BIN1O00499 593 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 ABLIM1O14639 778 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 N4BP3O15049 544 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 PROZP22891 400 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 LIG4P49917 911 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 FAM189BP81408 668 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 TMEM132AQ24JP5 1023 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 COBLL1Q53SF7 1204 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 C9orf50Q5SZB4 431 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 CAVIN1Q6NZI2 390 aaKnown RBP18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 SLC39A4Q6P5W5 647 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 SLC27A1Q6PCB7 646 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.22■□□□□ 0.512e-8■■■■■ 44.9
CHCHD3-201ENST00000262570 SMYD4Q8IYR2 804 aaPredicted RBP18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 TRIML1Q8N9V2 468 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 IKZF4Q9H2S9 585 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 C1orf112Q9NSG2 853 aa18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 CXXC1Q9P0U4 656 aaPredicted RBP18.22■□□□□ 0.51
CHCHD3-201ENST00000262570 KIF20AO95235 890 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 SHHQ15465 462 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 KNOP1Q1ED39 458 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 NELFCDQ8IXH7 590 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 GUF1Q8N442 669 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 SYAP1Q96A49 352 aaPredicted RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 ZBTB45Q96K62 511 aaPredicted RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 EIF2AQ9BY44 585 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 FAM105AQ9NUU6 356 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 ZMYM2Q9UBW7 1377 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 LAMA2P24043 3122 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 ZBBXA8MT70 800 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 ANKRD63C9JTQ0 380 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 ZNF623O75123 536 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 PRCPP42785 496 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 MPZL3Q6UWV2 235 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 CRIPAKQ8N1N5 446 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 ADPGKQ9BRR6 497 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 TCHPQ9BT92 498 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 GBP3Q9H0R5 595 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 MTIF3Q9H2K0 278 aaKnown RBP18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 PRO3102Q9H379 93 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 MAPK8IP1Q9UQF2 711 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 STYXL1Q9Y6J8 313 aa18.21■□□□□ 0.51
CHCHD3-201ENST00000262570 TISP43B9A030 160 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 CLDN3O15551 220 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 SKIP12755 728 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 ADSSP30520 456 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 KCNJ6P48051 423 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 RAB27AP51159 221 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 MCL1Q07820 350 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 ECHDC2Q86YB7 292 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 HAPLN2Q9GZV7 340 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 CDT1Q9H211 546 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 PCDHB2Q9Y5E7 798 aa18.2■□□□□ 0.5
CHCHD3-201ENST00000262570 NPTXRO95502 500 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 AMHP03971 560 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 DEFB103AP81534 67 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 DCAF4L1Q3SXM0 396 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 ZNF568Q3ZCX4 644 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 SLFN12LQ6IEE8 588 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 ZNF598Q86UK7 904 aaKnown RBP18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 ADSSL1Q8N142 457 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 SMG8Q8ND04 991 aaKnown RBP18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 TRIM6Q9C030 488 aaPredicted RBP18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 KCTD10Q9H3F6 313 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 ELAC1Q9H777 363 aaKnown RBP18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 ANKFY1Q9P2R3 1169 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 IPPQ9Y573 584 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 MICAL3Q7RTP6 2002 aa18.19■□□□□ 0.5
CHCHD3-201ENST00000262570 A0A0B4J269 797 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 EOMESO95936 686 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 MCF2P10911 925 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 ATF7P17544 494 aaPredicted RBP18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 SNRPFP62306 86 aaKnown RBP18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 NOLC1Q14978 699 aaKnown RBP eCLIP18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 CHRDL2Q6WN34 429 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 APBB1IPQ7Z5R6 666 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms