RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 LRCH2Q5VUJ6 765 aa19.33■□□□□ 0.68
TRAF4-201ENST00000262395 TRIM33Q9UPN9 1127 aa19.33■□□□□ 0.68
TRAF4-201ENST00000262395 STK38LQ9Y2H1 464 aa19.33■□□□□ 0.68
TRAF4-201ENST00000262395 RARAP10276 462 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 GAP43P17677 238 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 ICA1Q05084 483 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 BFSP1Q12934 665 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 NAA25Q14CX7 972 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 FIZ1Q96SL8 496 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 HSD17B14Q9BPX1 270 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 TBK1Q9UHD2 729 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 SYNGAP1Q96PV0 1343 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 TBX3O15119 743 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 GH1P01241 217 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 APOBEC3HQ6NTF7 200 aaKnown RBP19.32■□□□□ 0.68
TRAF4-201ENST00000262395 ZNF622Q969S3 477 aaKnown RBP eCLIP19.32■□□□□ 0.68
TRAF4-201ENST00000262395 PNMA3Q9UL41 463 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 PCDHA3Q9Y5H8 950 aa19.32■□□□□ 0.68
TRAF4-201ENST00000262395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.31■□□□□ 0.68
TRAF4-201ENST00000262395 SLC8A1P32418 973 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 PPP3CAQ08209 521 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 NUGGCQ68CJ6 796 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 MOXD1Q6UVY6 613 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 COL23A1Q86Y22 540 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-201ENST00000262395 P3H4Q92791 437 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 POLR3CQ9BUI4 534 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-201ENST00000262395 PFASO15067 1338 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 CLDN3O15551 220 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 SKAP2O75563 359 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-201ENST00000262395 NDUFB10O96000 172 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 COILP38432 576 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-201ENST00000262395 GPC5P78333 572 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 OTOP1Q7RTM1 612 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 RPAINQ86UA6 219 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 KIAA0825Q8IV33 1275 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 RHOT2Q8IXI1 618 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 ATG4AQ8WYN0 398 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 ECT2Q9H8V3 914 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 EP400Q96L91 3159 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 TMEM120BA0PK00 339 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 C21orf2O43822 256 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 CHKAP35790 457 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 PEX5P50542 639 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 KIF22Q14807 665 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 PPP2R5EQ16537 467 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 LMO3Q8TAP4 145 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 ARHGEF2Q92974 986 aaKnown RBP19.31■□□□□ 0.68
TRAF4-201ENST00000262395 FAM118BQ9BPY3 351 aa19.31■□□□□ 0.68
TRAF4-201ENST00000262395 CDC42EP4Q9H3Q1 356 aaKnown RBP19.31■□□□□ 0.68
TRAF4-201ENST00000262395 ADAMTSL1Q8N6G6 1762 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 EIF3DO15371 548 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRAF4-201ENST00000262395 SNX3O60493 162 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 CTNNA2P26232 953 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 JAG1P78504 1218 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 ITIH4Q14624 930 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 PPP2R5AQ15172 486 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 NSMCE1Q8WV22 266 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 GOLGA8IPA6NC78 632 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 GOLGA8JA6NMD2 632 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 G3V3G9 751 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 RGL2O15211 777 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 CYP26A1O43174 497 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 PAX7P23759 505 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 DRG2P55039 364 aaKnown RBP19.3■□□□□ 0.68
TRAF4-201ENST00000262395 SPDYCQ5MJ68 293 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 DCAF8Q5TAQ9 597 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 SYDE2Q5VT97 1194 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 AGAP11Q8TF27 550 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 DCAF4Q8WV16 495 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 MIEF2Q96C03 454 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 C8orf37Q96NL8 207 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 ZC3H12CQ9C0D7 883 aaKnown RBP19.3■□□□□ 0.68
TRAF4-201ENST00000262395 PCYOX1Q9UHG3 505 aa19.3■□□□□ 0.68
TRAF4-201ENST00000262395 IGLV3-22A0A075B6J6 115 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 IGF2BP3O00425 579 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRAF4-201ENST00000262395 PODXLO00592 558 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 BCRP11274 1271 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 CCDC174Q6PII3 467 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 NOP9Q86U38 636 aaKnown RBP19.29■□□□□ 0.68
TRAF4-201ENST00000262395 SLC47A2Q86VL8 602 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 CRAMP1Q96RY5 1269 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 CBWD1Q9BRT8 395 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 TACO1Q9BSH4 297 aaKnown RBP19.29■□□□□ 0.68
TRAF4-201ENST00000262395 NUP85Q9BW27 656 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 ASIC3Q9UHC3 531 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 K7ENM7 598 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 ALDH5A1P51649 535 aaPredicted RBP19.29■□□□□ 0.68
TRAF4-201ENST00000262395 NCALDP61601 193 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 MAP2K1Q02750 393 aaPredicted RBP19.29■□□□□ 0.68
TRAF4-201ENST00000262395 CALCOCO2Q13137 446 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 CRY2Q49AN0 593 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 RNF207Q6ZRF8 634 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 SLC13A5Q86YT5 568 aaPredicted RBP19.29■□□□□ 0.68
TRAF4-201ENST00000262395 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 DMAC2Q9NW81 257 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 ATP8B3O60423 1300 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 AFF2P51816 1311 aa19.29■□□□□ 0.68
TRAF4-201ENST00000262395 MIF4GDA9UHW6 222 aaKnown RBP19.28■□□□□ 0.68
TRAF4-201ENST00000262395 SLC26A4O43511 780 aa19.28■□□□□ 0.68
TRAF4-201ENST00000262395 GAS7O60861 476 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms