RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 CLEC4FQ8N1N0 589 aa17.3■□□□□ 0.36
NEO1-201ENST00000261908 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 TTC26A0AVF1 554 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 HSPA9P38646 679 aaKnown RBP17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 ZNF568Q3ZCX4 644 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 USP17L6PQ6QN14 398 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 KCTD17Q8N5Z5 321 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 OR2W6PQ8NHA6 318 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 SH3GL3Q99963 347 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 TMEM161AQ9NX61 479 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 SLC9A2Q9UBY0 812 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 XPO1O14980 1071 aaKnown RBP17.29■□□□□ 0.36
NEO1-201ENST00000261908 CHN1P15882 459 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 CIITAP33076 1130 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 VAMP7P51809 220 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 THEMIS2Q5TEJ8 643 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 ANKRD40Q6AI12 368 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 ZNF513Q8N8E2 541 aaPredicted RBP17.29■□□□□ 0.36
NEO1-201ENST00000261908 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 CYP26B1Q9NR63 512 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 KCNA3P22001 575 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 TOB2Q14106 344 aaPredicted RBP17.29■□□□□ 0.36
NEO1-201ENST00000261908 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 IFNEQ86WN2 208 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
NEO1-201ENST00000261908 ORC4O43929 436 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 SERPIND1P05546 499 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 PPP1R2P3Q6NXS1 205 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 PGBD4Q96DM1 585 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 H0Y626 953 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 CIAO1O76071 339 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 TRIM16O95361 564 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 TEDDM1Q5T9Z0 273 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 CATSPER4Q7RTX7 472 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 PATL1Q86TB9 770 aaKnown RBP17.29■□□□□ 0.36
NEO1-201ENST00000261908 CNKSR1Q969H4 720 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 RHBDL2Q9NX52 303 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 CCDC142Q17RM4 750 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 SLC30A5Q8TAD4 765 aa17.29■□□□□ 0.36
NEO1-201ENST00000261908 MRPL40Q9NQ50 206 aaKnown RBP17.29■□□□□ 0.36
NEO1-201ENST00000261908 FAM196BA6NMK8 535 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 ANGPT1Q15389 498 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 PDXDC1Q6P996 788 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 FBXO2Q9UK22 296 aaPredicted RBP17.28■□□□□ 0.36
NEO1-201ENST00000261908 ATP10BO94823 1461 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 CFAP73A6NFT4 308 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 USP14P54578 494 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 TMCC1O94876 653 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 SESN2P58004 480 aaPredicted RBP17.28■□□□□ 0.36
NEO1-201ENST00000261908 MTMR1Q13613 665 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 NAALADL2Q58DX5 795 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 SP110Q9HB58 689 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 KCNN4O15554 427 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 CHRNA3P32297 505 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 GPC3P51654 580 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 LVRNQ6Q4G3 990 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 ARHGEF1Q92888 912 aaKnown RBP17.28■□□□□ 0.36
NEO1-201ENST00000261908 CNBD2Q96M20 576 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 PSMC5P62195 406 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 AARS2Q5JTZ9 985 aaKnown RBP17.28■□□□□ 0.36
NEO1-201ENST00000261908 LMBRD2Q68DH5 695 aaPredicted RBP17.28■□□□□ 0.36
NEO1-201ENST00000261908 SNAP23O00161 211 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 FCER1AP12319 257 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 FAM83BQ5T0W9 1011 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 FAM102AQ5T9C2 384 aaPredicted RBP17.28■□□□□ 0.36
NEO1-201ENST00000261908 PLEKHM3Q6ZWE6 761 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 SPATA21Q7Z572 469 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
NEO1-201ENST00000261908 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
NEO1-201ENST00000261908 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 KRT8P05787 483 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 TRAF7Q6Q0C0 670 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 MTBPQ96DY7 904 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 ATP10DQ9P241 1426 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 NECTIN1Q15223 517 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 KRT39Q6A163 491 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 TMEM35BQ8NCS4 154 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 CLMNQ96JQ2 1002 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 TRIM51Q9BSJ1 452 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 ZMYM3Q14202 1370 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 PRR23D1E9PI22 279 aaPredicted RBP17.27■□□□□ 0.36
NEO1-201ENST00000261908 STXBP3O00186 592 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 AIM2O14862 343 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 KRT75O95678 551 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 TRIM49P0CI25 452 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 TRIM49CP0CI26 452 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 PRR23D2P0DMB1 279 aaPredicted RBP17.27■□□□□ 0.36
NEO1-201ENST00000261908 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
NEO1-201ENST00000261908 TMCO5AQ8N6Q1 288 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms