RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 ANKMY2Q8IV38 441 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 PLVAPQ9BX97 442 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 MARCOQ9UEW3 520 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 ZNF148Q9UQR1 794 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 MYH2Q9UKX2 1941 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 FAM187AA6NFU0 413 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 PODXLO00592 558 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 MAP3K13O43283 966 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 RFC4P35249 363 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 MYL7Q01449 175 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 BNIP1Q12981 228 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 THOC5Q13769 683 aaKnown RBP17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 DUPD1Q68J44 220 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 TTC17Q96AE7 1141 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 IQCGQ9H095 443 aaKnown RBP17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 TCEAL9Q9UHQ7 104 aa17.02■□□□□ 0.31
PRPF40B-201ENST00000261897 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 UNC5CO95185 931 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 COG2Q14746 738 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 ERFEQ4G0M1 354 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 DPP8Q6V1X1 898 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 LRRC57Q8N9N7 239 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 FBXO41Q8TF61 875 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 SCG3Q8WXD2 468 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 EZH1Q92800 747 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 SH3GLB2Q9NR46 395 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 IKBKGQ9Y6K9 419 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 CREB3O43889 395 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 PRELID2Q8N945 189 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 CEP70Q8NHQ1 597 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 ATP8B4Q8TF62 1192 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 MTA3Q9BTC8 594 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 ARMCX1Q9P291 453 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 NAALADL1Q9UQQ1 740 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 SOX5P35711 763 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 COG7P83436 770 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 BTKQ06187 659 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 DHX34Q14147 1143 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 KPNB1Q14974 876 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 RFWD3Q6PCD5 774 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 NMD3Q96D46 503 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 GANQ9H2C0 597 aa17.01■□□□□ 0.31
PRPF40B-201ENST00000261897 RPTORQ8N122 1335 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 C2orf71A6NGG8 1288 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 FOXN3O00409 490 aaPredicted RBP17■□□□□ 0.31
PRPF40B-201ENST00000261897 PPP2R5EQ16537 467 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 TTC27Q6P3X3 843 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 ARHGAP22Q7Z5H3 698 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 CYP4X1Q8N118 509 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 LNX1Q8TBB1 728 aaPredicted RBP17■□□□□ 0.31
PRPF40B-201ENST00000261897 PLA2G12BQ9BX93 195 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 SYNGAP1Q96PV0 1343 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 PI4K2BG5E9Z4 385 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 HOXA13P31271 388 aaPredicted RBP17■□□□□ 0.31
PRPF40B-201ENST00000261897 RIPK1Q13546 671 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 PPP1R21Q6ZMI0 780 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 NUP85Q9BW27 656 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 PAEPP09466 180 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 DYNLT1P63172 113 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 ROR2Q01974 943 aaKnown RBP17■□□□□ 0.31
PRPF40B-201ENST00000261897 KLRC3Q07444 240 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 SPARCL1Q14515 664 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 PPP1R14CQ8TAE6 165 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 ADAM7Q9H2U9 754 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 NMRK1Q9NWW6 199 aa17■□□□□ 0.31
PRPF40B-201ENST00000261897 CCDC195A0A1B0GUA6 201 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 SLURP2P0DP57 97 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 MARK3P27448 753 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 COILP38432 576 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 EPHB1P54762 984 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 SLC35G1Q2M3R5 365 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 DCAF12L1Q5VU92 463 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 CDCA2Q69YH5 1023 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 MAIP1Q8WWC4 291 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 SYN2Q92777 582 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 TRABDQ9H4I3 376 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 DENND2DQ9H6A0 471 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 ANAPC4Q9UJX5 808 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 PITPNM2Q9BZ72 1349 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 RARGP13631 454 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 SP100P23497 879 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 MPP2Q14168 576 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 ODR4Q5SWX8 454 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 FAM178BQ8IXR5 827 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 EPAS1Q99814 870 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 RUSC1Q9BVN2 902 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 CARD9Q9H257 536 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 CYP39A1Q9NYL5 469 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 ANAPC7Q9UJX3 599 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 MRC1P22897 1456 aa16.99■□□□□ 0.31
PRPF40B-201ENST00000261897 AHCYL1O43865 530 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 CIB2O75838 187 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 STK10O94804 968 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms