RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 MGAT5BQ3V5L5 792 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 KIFC3Q9BVG8 833 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 PAMP19021 973 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 CUL4AQ13619 759 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 DYRK4Q9NR20 520 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 FAM49BQ9NUQ9 324 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
SPG11-201ENST00000261866 SCHIP1Q9P0W5 487 aaPredicted RBP12.94□□□□□ -0.34
SPG11-201ENST00000261866 SLC13A4Q9UKG4 626 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 RASGRF2O14827 1237 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 ZC2HC1CQ53FD0 456 aaPredicted RBP12.94□□□□□ -0.34
SPG11-201ENST00000261866 FMO2Q99518 471 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 MTMR4Q9NYA4 1195 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 A0A0G2JND7 137 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 RPS6KA5O75582 802 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 PGK2P07205 417 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 OCM2P0CE71 109 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 OCMP0CE72 109 aaPredicted RBP12.94□□□□□ -0.34
SPG11-201ENST00000261866 CCNYL1Q8N7R7 359 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 COG4Q9H9E3 785 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 RRAGCQ9HB90 399 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 TEX33O43247 280 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 ORC1Q13415 861 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 NFRKBQ6P4R8 1299 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 PDIK1LQ8N165 341 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 SLC13A1Q9BZW2 595 aa12.94□□□□□ -0.34
SPG11-201ENST00000261866 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 CA4P22748 312 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 EPHB4P54760 987 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 IMPG1Q17R60 797 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 OR6P1Q8NGX9 317 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 CEP72Q9P209 647 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 TJP2Q9UDY2 1190 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 MTM1Q13496 603 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 GNASQ5JWF2 1037 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 ESYT3A0FGR9 886 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 H3BRJ5 948 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 FBXL13Q8NEE6 735 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 PRR12Q9ULL5 1215 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 EFHC2Q5JST6 749 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 ABHD10Q9NUJ1 306 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 TECPR2O15040 1411 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 CYTH2Q99418 400 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 SUN1O94901 812 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 ZRANB2O95218 330 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPG11-201ENST00000261866 ANP32DO95626 131 aa12.93□□□□□ -0.34
SPG11-201ENST00000261866 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
SPG11-201ENST00000261866 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
SPG11-201ENST00000261866 GPS1Q13098 491 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 CEP55Q53EZ4 464 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 GLRA4Q5JXX5 417 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 ABTB1Q969K4 478 aaPredicted RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 CHORDC1Q9UHD1 332 aaPredicted RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 SPAG7O75391 227 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 PCSK7Q16549 785 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 HEATR6Q6AI08 1181 aaKnown RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 EFCAB12Q6NXP0 572 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 CCDC197Q8NCU1 140 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 RALAP11233 206 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 ETFBP38117 255 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 CCDC85BQ15834 202 aaPredicted RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 ANKMY2Q8IV38 441 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 UBA3Q8TBC4 463 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 CLCA2Q9UQC9 943 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 CLTCQ00610 1675 aaKnown RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 IQSEC2Q5JU85 1478 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 CDH6P55285 790 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 TAF1BQ53T94 588 aaPredicted RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 PPM1NQ8N819 430 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 CRAMP1Q96RY5 1269 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 TEX13BQ9BXU2 312 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 STRIP2Q9ULQ0 834 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 GH1P01241 217 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 MAP3K21Q5TCX8 1036 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 KRT39Q6A163 491 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 VCX3AQ9NNX9 186 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 ALG13Q9NP73 1137 aaKnown RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 RFWD2Q8NHY2 731 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 HASPINQ8TF76 798 aa12.92□□□□□ -0.34
SPG11-201ENST00000261866 DHX38Q92620 1227 aaKnown RBP12.92□□□□□ -0.34
SPG11-201ENST00000261866 CEP152O94986 1710 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 QRICH2Q9H0J4 1663 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 CHEK2O96017 543 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms