RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 RIMBP2O15034 1052 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 SCNN1DP51172 638 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 DLG4P78352 724 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 GPSM2P81274 684 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 SPIRE1Q08AE8 756 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 GRAPQ13588 217 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 CRELD2Q6UXH1 353 aaPredicted RBP17.09■□□□□ 0.33
LMNB1-201ENST00000261366 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
LMNB1-201ENST00000261366 GRAPLQ8TC17 118 aaPredicted RBP17.09■□□□□ 0.33
LMNB1-201ENST00000261366 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 SPATA31A6Q5VVP1 1343 aa17.09■□□□□ 0.33
LMNB1-201ENST00000261366 BTAF1O14981 1849 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 EXOC3O60645 756 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 CAPRIN2Q6IMN6 1127 aaKnown RBP17.08■□□□□ 0.33
LMNB1-201ENST00000261366 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 VSTM1Q6UX27 236 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 CYP4X1Q8N118 509 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 AGPAT1Q99943 283 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 APEX2Q9UBZ4 518 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.33
LMNB1-201ENST00000261366 MYO3BQ8WXR4 1341 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 SYNGAP1Q96PV0 1343 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 IRS2Q9Y4H2 1338 aa17.08■□□□□ 0.33
LMNB1-201ENST00000261366 DDX60LQ5H9U9 1706 aaKnown RBP17.08■□□□□ 0.32
LMNB1-201ENST00000261366 CALCAP01258 141 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 RPA1P27694 616 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 COILP38432 576 aaPredicted RBP17.08■□□□□ 0.32
LMNB1-201ENST00000261366 GTF2IP78347 998 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 ANKRD20A2Q5SQ80 823 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 HP1BP3Q5SSJ5 553 aaPredicted RBP17.08■□□□□ 0.32
LMNB1-201ENST00000261366 ANKRD20A1Q5TYW2 823 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 ANKRD20A3Q5VUR7 823 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 TAOK3Q9H2K8 898 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 ADAM22Q9P0K1 906 aa17.08■□□□□ 0.32
LMNB1-201ENST00000261366 RARGP13631 454 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 SLC8A3P57103 927 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 CAPN12Q6ZSI9 719 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 STMN4Q9H169 189 aaPredicted RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 ATP2A2P16615 1042 aaKnown RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 GCLMP48507 274 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 CACNB3P54284 484 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 ATP11AP98196 1134 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 KRT17Q04695 432 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 MGAT5Q09328 741 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 BNIP1Q12981 228 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 RIPK1Q13546 671 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 TAF11Q15544 211 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 DAB2IPQ5VWQ8 1189 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 RINT1Q6NUQ1 792 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 ARHGEF19Q8IW93 802 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 SLFN12Q8IYM2 578 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 ETNPPLQ8TBG4 499 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 SPOCK2Q92563 424 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 RPGRQ92834 1020 aaKnown RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 EIF2AK1Q9BQI3 630 aaKnown RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 PLCD4Q9BRC7 762 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 PODXLO00592 558 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 PDHA1P08559 390 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 SNHG28P0DPA3 235 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 SATB1Q01826 763 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 SLMAPQ14BN4 828 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 ZNF449Q6P9G9 518 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 RNF207Q6ZRF8 634 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 NKX1-2Q9UD57 310 aaPredicted RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
LMNB1-201ENST00000261366 DAGLAQ9Y4D2 1042 aa17.07■□□□□ 0.32
LMNB1-201ENST00000261366 ZMYM2Q9UBW7 1377 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 PASKQ96RG2 1323 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 MEIS2O14770 477 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
LMNB1-201ENST00000261366 SPAG7O75391 227 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 ECEL1O95672 775 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
LMNB1-201ENST00000261366 PPP2R5EQ16537 467 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 HS2ST1Q7LGA3 356 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 MAB21L3Q8N8X9 362 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
LMNB1-201ENST00000261366 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 ARL2BPQ9Y2Y0 163 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 PPP1R12AO14974 1030 aaPredicted RBP17.06■□□□□ 0.32
LMNB1-201ENST00000261366 MSH4O15457 936 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 THAP12O43422 761 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 SGPL1O95470 568 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 CCND1P24385 295 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 HSPA1LP34931 641 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 TCP10Q12799 353 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 RRP1BQ14684 758 aaKnown RBP17.06■□□□□ 0.32
LMNB1-201ENST00000261366 C2CD6Q53TS8 623 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 BORCS6Q96GS4 357 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 C9orf72Q96LT7 481 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 SLC5A4Q9NY91 659 aa17.06■□□□□ 0.32
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