RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 POLR3CQ9BUI4 534 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 RBAKQ9NYW8 714 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 AFF2P51816 1311 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 CPB1P15086 417 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 MDM2Q00987 491 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 FASTKD5Q7L8L6 764 aaKnown RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 FMR1NBQ8N0W7 255 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 TRIML2Q8N7C3 387 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 SH2D3AQ9BRG2 576 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 NDFIP2Q9NV92 336 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 CFAP69A5D8W1 941 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 F8W8V4 182 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 TFDP2Q14188 446 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 WDR75Q8IWA0 830 aaKnown RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 KRT38O76015 456 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ANKMY2Q8IV38 441 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 SPON2Q9BUD6 331 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 SETBP1Q9Y6X0 1596 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 TMEM247A6NEH6 219 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 GSG1L2A8MUP6 293 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 KLHL38Q2WGJ6 581 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ELMSAN1Q6PJG2 1045 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 SCG3Q8WXD2 468 aaKnown RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 N4BP2L2Q92802 583 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 EXOC4Q96A65 974 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ARL8AQ96BM9 186 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ULK4Q96C45 1275 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 TMEM60Q9H2L4 133 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ALG13Q9NP73 1137 aaKnown RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 MIF4GDA9UHW6 222 aaKnown RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 SKIP12755 728 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 NMT1P30419 496 aaKnown RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 PSMC5P62195 406 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 C1orf146Q5VVC0 180 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 GLYCTKQ8IVS8 523 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 FAM20AQ96MK3 541 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ADAM33Q9BZ11 813 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 LAMC1P11047 1609 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 HOXA7P31268 230 aaPredicted RBP12.85□□□□□ -0.35
COL8A1-201ENST00000261037 EFHC2Q5JST6 749 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ANKRD40Q6AI12 368 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 PIDD1Q9HB75 910 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 FGFR1OP2Q9NVK5 253 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 SLC9A2Q9UBY0 812 aa12.85□□□□□ -0.35
COL8A1-201ENST00000261037 FGFR4P22455 802 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 SFNP31947 248 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 MTMR2Q13614 643 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 KRT39Q6A163 491 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 ACAD9Q9H845 621 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
COL8A1-201ENST00000261037 KCNQ2O43526 872 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 ATP9BO43861 1147 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
COL8A1-201ENST00000261037 MCF2P10911 925 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 E2F4Q16254 413 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 TGS1Q96RS0 853 aaKnown RBP12.84□□□□□ -0.35
COL8A1-201ENST00000261037 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
COL8A1-201ENST00000261037 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 SFMBT1Q9UHJ3 866 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 CYP26A1O43174 497 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 CHRNA5P30532 468 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 ATICP31939 592 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 SULT1E1P49888 294 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 SCARF1Q14162 830 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 NCAPHQ15003 741 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 MDH1BQ5I0G3 518 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 AP1ARQ63HQ0 302 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
COL8A1-201ENST00000261037 DDIASQ8IXT1 998 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 C2orf40Q9H1Z8 148 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 AGO2Q9UKV8 859 aaKnown RBP12.84□□□□□ -0.35
COL8A1-201ENST00000261037 PRPF4O43172 522 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL8A1-201ENST00000261037 HMGCS2P54868 508 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 FSCBQ5H9T9 825 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 SHC4Q6S5L8 630 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 SARM1Q6SZW1 724 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 ASIC4Q96FT7 647 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 SNF8Q96H20 258 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
COL8A1-201ENST00000261037 PVALEFA0A1B0GWK0 134 aa12.83□□□□□ -0.35
COL8A1-201ENST00000261037 SMARCA1P28370 1054 aa12.83□□□□□ -0.35
COL8A1-201ENST00000261037 YWHABP31946 246 aaKnown RBP12.83□□□□□ -0.35
COL8A1-201ENST00000261037 VCPP55072 806 aaKnown RBP12.83□□□□□ -0.35
COL8A1-201ENST00000261037 FOXO4P98177 505 aa12.83□□□□□ -0.35
COL8A1-201ENST00000261037 NAALADL2Q58DX5 795 aa12.83□□□□□ -0.35
COL8A1-201ENST00000261037 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.35
COL8A1-201ENST00000261037 APOBEC3FQ8IUX4 373 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms